Detailed information on CNT30621468


BLAST search results

BLAST vs Swiss-Prot:
sp|O80340|ERF78_ARATH, E-value = 1e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630024Cajanus cajanVigna unguiculata922.7389.23195forward
CNT30585986Cajanus cajanMusa acuminata6.4620.6285.71140forward
CNT30234912Cajanus cajanBrassica oleracea8.6340.2280.75187forward
CNT30474096Cajanus cajanSaccharum spontaneum7.8944.8887.13171forward
CNT30153825Cajanus cajanPrunus persica7.0227.7984.21152forward
CNT30572283Cajanus cajanVitis vinifera6.7931.1480.27147forward
CNT30116505Cajanus cajanOryza nivara7.6222.5184.24165forward
CNT3051215Cajanus cajanCucumis sativus6.8824.5184.56149forward

Expression of CNT30621468

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MSVRSQPTKSNNAFHGKKKKKKTKPNVHQTKLHLSKLAHK*

>peptide 2 (36 aa)
MLQKARKIEKPKTRSTNQATSGRGGTFRSRSKSPRR*

>peptide 3 (96 aa)
MNSDSHIVNTECPRGTHLPLLIHSSFLVSSFYAPFSPSVPPAPIYLIKTPFANHQNTLLTSSLSKSPFFSILFFLLSHSNSPYIITIQLLPTNRIT*

>peptide 4 (76 aa)
MFITFSARAKASKKRTGRETGKERAAAAAESGVRVRSSGGGGEEEESSVLLWLGLRALLTSSEGVGKLVLALAPRN*

>peptide 5 (63 aa)
MPATCLSDLNQRNPTTHSMERKKKKKQSQMFIKQNYIYLSLRTNKWIMSHIIQIVYTETRTLK*

>peptide 6 (46 aa)
MSEGKKASRSGFIGRNGERERERGCACVRVNWHAPPKRFMGREGESE

>peptide 7 (32 aa)
MDNVTYYTDCLYRNQNPKMNMIDRNASKYLYI*

>peptide 8 (34 aa)
MYRDTLTGLIVSWLGITLFFNYYYMCYRSKKEIV*

>peptide 9 (30 aa)
MRHERVELERVGKGGDTGKMGAQKHHVKTT*

>peptide 10 (30 aa)
MEREREREGVRACVLIGTLPRSGLWAEKEKV

>peptide 11 (88 aa)
MPVSIYIFNFEEIAETTGDTLNKFSVAKNTEKAKTTFAFGYKHIYITCRLSNYLQPIRASCQLLTGDSIFFPSSKMVALRDASKSAKN*

Sequence

>CNT30621468
GCCAAATTTAAAAAGGGTGAGATTAAATTTTATGATTAATTATAATTTTTTAATTTATTTTATCTAACGAGACCCATTTTGAAGCTGAACCGAATGTACC
GGGACACTTTGACAGGTCTAATAGTTAGTTGGTTGGGTATTACGTTATTCTTTAATTATTATTACATGTGTTATCGAAGCAAGAAGGAAATTGTTTGAAA
TATTATTTATTTACTTTGAAAGTAGATGAGGCATGAGAGAGTTGAACTTGAAAGAGTGGGAAAAGGTGGAGACACAGGAAAGATGGGGGCGCAGAAACAT
CACGTGAAGACAACATGAACTCCGACAGCCACATAGTCAACACGGAATGCCCACGTGGGACCCACCTCCCTCTCCTCATTCACTCTTCCTTTCTAGTTTC
TAGTTTCTACGCACCGTTTTCGCCGTCGGTGCCGCCTGCGCCCATTTATTTAATCAAAACCCCCTTCGCGAATCACCAGAATACCCTCTTAACATCATCA
CTCTCTAAAAGCCCCTTTTTCTCAATTCTTTTTTTTCTACTTTCACATTCCAATTCACCCTATATAATCACCATTCAATTGCTACCCACCAATAGAATCA
CCTAAAACTCACTCAACTCTCGCTGACTCAATTTTCTTTTCCCTTAAAAAATTGCAACCAAGTAGGTCCCGCGGTGACACTAGGAACTAGGAAGCAATAC
GGGTTTTCTTTCTTTATTTCTATTTTCATTAATTTTGGTACAAAGGCATTTTATATATGGTTCGTAGTTGATACTTAACAGCAACGCTTGCATATCCGAA
TGTGTAAAAAGAACAAACCAATCAAGTAACATACGGAAGAGAGAGGCCCCCACGACAAAAACCTAATCAAACGCGCAACAATGCCGGCGACATGTCTGTC
AGATCTCAACCAACGAAATCCAACAACGCATTCCATGGAAAGAAAAAAAAAAAAAAAACAAAGCCAAATGTTCATCAAACAAAACTACATCTATCTAAGC
TTGCGCACAAATAAATGGATAATGTCACATATTATACAGATTGTCTATACAGAAACCAGAACCCTAAAATGAACATGATAGATAGAAATGCCAGTAAGTA
TTTATATATTTAATTTTGAGGAAATTGCAGAAACAACGGGAGATACTCTGAATAAGTTCTCAGTTGCAAAAAACACTGAAAAAGCAAAAACCACGTTTGC
TTTCGGTTATAAGCATATTTACATAACGTGCCGGTTATCTAATTATCTTCAACCAATCCGAGCATCGTGTCAACTACTCACTGGAGATTCCATTTTTTTT
CCCTCTTCCAAAATGGTAGCACTACGAGATGCTTCAAAAAGCGCGAAAAATTGAGAAACCAAAAACCAGATCGACGAATCAGGCAACCTCCGGGAGGGGA
GGAACGTTCAGGTCGAGATCCAAGAGTCCGCGCCGCTGAGCGGCGGACGAAGAATCGGAATCGACGCGGCGGAATTCCGCCGCCGGACGCTCAAACCCGC
AGGTCTCGCGGCGGGGGATGTTCATCACGTTTTCGGCGCGGGCGAAGGCGTCGAAGAAGAGGACGGGACGAGAGACGGGGAAGGAGAGGGCGGCGGCGGC
GGCGGAGAGCGGCGTGAGGGTGAGGTCGAGCGGCGGCGGAGGGGAGGAGGAGGAGTCGAGCGTGCTGCTCTGGCTGGGACTACGCGCGTTGTTAACGAGT
TCGGAAGGAGTGGGGAAATTGGTCTTGGCCTTGGCGCCGCGAAACTGACGCGCGGCGGTGTCGTAGGCGCGCGCAGCTTCCTCGGCGGTGTCGAAGGTGC
CGAGCCAGACACGTGTTTTCTTGCCCGGGTCGCGGATCTCGGCGGCGTAGCGTCCCCAGGGGCGTTTCCTGACGCCTCTGTAGCGGATCTCTTTGGCGGT
GGCGTGGGGCGGTGTTGGGCCTGGGGCGGGCCCAGCAAGCGCAGTGGGTCTGTTGTCTCTTGGAGCCATTGGTGTTGTTGTAATTAAAAATCTTTGTGAA
GGTGGAAGAGAAAAAGAGAGAGACAATGTCTGAGGGGAAGAAAGCAAGTAGGAGTGGTTTTATAGGGCGAAATGGAGAGAGAGAGAGAGAGAGAGGGTGT
GCGTGCGTGCGTGTTAATTGGCACGCTCCCCCGAAGCGGTTTATGGGCAGAGAAGGAGAAAGTGAG