Detailed information on CNT30621375


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SQL2|CB24_PEA, E-value = 3e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728535Cajanus cajanCorchorus capsularis29.844.0682.24152forward
CNT30381598Cajanus cajanManihot esculenta39.2235.9785.5200forward
CNT30526306Cajanus cajanPhaseolus vulgaris30.3916.5494.19155forward
CNT30631290Cajanus cajanVigna unguiculata42.5567.1885.71217forward
CNT30708773Cajanus cajanGlycine max43.7335.5194.17223forward
CNT3084615Cajanus cajanVigna radiata75.2933.2886.98384forward
CNT30171733Cajanus cajanTrifolium pratense29.4121.4382150forward
CNT30144553Cajanus cajanMedicago truncatula11.7620.4193.3360forward
CNT30605371Cajanus cajanGossypium raimondii15.6931.588.7580forward
CNT30573808Cajanus cajanVitis vinifera30.3924.3781.94155forward
CNT30723301Cajanus cajanLupinus angustifolius23.5328.183.33120forward

Expression of CNT30621375

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MMVLCHGSEMCCKRLSNVPSPWPPKLVQSSRG*

>peptide 2 (44 aa)
MNIDMDFINHAQISLKIHPFGTHYTRRTQAYHVIAYKLNSHELY*

>peptide 3 (62 aa)
MGLRCAARGYQMFLLLGLQSWCKVQGVEYTTRVSTLMWGQAILLENRVLVDRTRVLNVLPSSD

Sequence

>CNT30621375
GGTGGCAGAGTTTTGAAATTTGAAATTTGTATAATAAATGCAAGTAAAATTTACATACTTTAGAAATGATGCATTAGATTTTTTAAAATTTTTTAGAGTA
TCATGTTTAGTTACTAATTGATGGAGTCGAGTCTAAACAACAATATAAAACCATCTTAATTCCTCTGTACATGAACATAGATATGGATTTTATCAATCAC
GCCCAAATCTCTCTCAAAATTCATCCATTCGGGACACATTACACGAGAAGGACACAGGCTTATCATGTCATTGCATACAAACTTAATAGCCACGAATTGT
ATTGATGATGGTGTTGTGCCATGGGTCTGAGATGTGCTGCAAGAGGTTATCAAATGTTCCTTCTCCTTGGCCTCCAAAGTTGGTGCAAAGTTCAAGGGGT
TGAATACACTACCAGGGTATCCACACTCATGTGGGGGCAAGCTATATTGCTTGAAAATAGGGTCTTGGTTGACAGAACCAGGGTTCTTAATGTCCTGCCA
TCTTCTGATC