Detailed information on CNT30621081


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMS9|ATPF_SOYBN, E-value = 2e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Cajanus cajanOryza sativa48.959.0382.97511forward
CNT30535895Cajanus cajanEucalyptus grandis11.8822.3888.71124forward
CNT30703171Cajanus cajanQuercus lobata51.924.5589.11542forward
CNT30282912Cajanus cajanChenopodium quinoa52.3951.0388.3547forward
CNT30632292Cajanus cajanVigna unguiculata37.5513.0792.86392forward
CNT30202122Cajanus cajanPisum sativum6.0327.1687.363reverse complement
CNT30505351Cajanus cajanNicotiana attenuata45.413.6488.61474forward
CNT3095993Cajanus cajanSolanum tuberosum33.818.8286.97353forward
CNT30291829Cajanus cajanTriticum aestivum48.9512.9682.58511forward
CNT30222903Cajanus cajanHordeum vulgare11.441.7586.55119forward
CNT3086153Cajanus cajanVigna radiata17.8284.1693.01186reverse complement
CNT30541474Cajanus cajanBrassica napus52.5917.9585.43549forward
CNT30511193Cajanus cajanSolanum lycopersicum37.5522.1284.18392forward
CNT30554216Cajanus cajanOryza glaberrima49.0478.5382.81512forward
CNT30145240Cajanus cajanMedicago truncatula27.4951.6292.68287forward
CNT30660677Cajanus cajanTriticum dicoccoides48.9538.3182.39511forward
CNT30598585Cajanus cajanFraxinus excelsior48.3759.289.7505forward
CNT3017990Cajanus cajanZea mays48.9515.4482.58511forward
CNT30205079Cajanus cajanHelianthus annuus49.0470.8287.89512forward
CNT30689283Cajanus cajanTriticum urartu33.8113.9180.74353forward
CNT30409854Cajanus cajanPapaver somniferum52.5982.8187.8549forward
CNT3058165Cajanus cajanAmborella trichopoda7.3830.4384.4277reverse complement
CNT30121210Cajanus cajanCitrus clementina52.5914.0987.25549forward
CNT30551824Cajanus cajanOryza brachyantha5.4623.3691.2357forward

Expression of CNT30621081

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MPMLTLTVRKCNSLFKQLFRVPRAPCKACCKTRCRT*

>peptide 2 (35 aa)
MISSPLMNRLIFFLRLLYYLNWSINWKIPYKNDTY*

Sequence

>CNT30621081
CATGAAAATTGCGTAATTTTATTCTTTTTTTTTAGAAGAAAAAATAATTCCTATACTCTATATTATAATAGAAAGACTAATTAGTTATTTTTATCAATTA
TTTTTTTCTTTCATCGTCCCAAACATGCCAATGTTAACATTGACAGTACGAAAATGTAACTCGTTGTTCAAGCAACTATTTAGAGTTCCTAGAGCTCCCT
GTAAGGCTTGTTGTAAAACCCGTTGTCGGACTTGATTAATCACTCTTTGTTGTTCAAAATGAATGGCTTCGTTTTTGTAATTTTCTAATTGTTCTAAAGT
TGTATAAATTGAATTAATTAAATTCAATTTTTCTCGTTCGATCTCAGAATAGCCATTCACCCGAAACCGATCTGCTTCCGTTTCAACTTTCCTTAAACGT
GCCTGGGCTTTTTCCAGCTGTTCAATCGCCCCTTCCCGTAGTTCTTCTGAATTTCGAATAGTTCTCAAGATTCTCTGTTTTCGATTATCTAATAAATCAC
TTAACACTCCCTTTCCAAAAAAAACCAATACACCTAACACTACACTTAGATTTATTGGATTTGTTGCTAAAATATCGGTATTAAACCCGAAACTTCCGGC
GGATGGCCAATAGCCCAAACAAAGGAAAGAATCGGTTATATTTTTCATATGATCTCATCTCCTCTTATGAATAGACTCATTTTCTTTCTACGACTCCTAT
ATTATTTGAATTGGTCAATTAATTGGAAGATTCCCTATAAGAATGATACTTATTAGAATTAGATACTAGTTCTTATGTCAATTGCAAAATCTCTCTAGTT
TTAACACTTTCCAAAATTTTATAAAAAAAAAAAAAAAGAGTTCGTTGGACTAAAAAAGAGAAGAAAGAAGGCGAATCAGTATGTAAATTCTTCACCTTTC
AATTAGTCCTTCCCTTGTGTTCTTGTCCTAACGTTTAAATAATTTTAGGAGTGAAATCTTAATATAATTCGAAAAAGCAAAACCGGCAAAGCAAGTCCAG
GGAAAAAAGTATATCTATTTTTAGTTTTCTTTTTTTTAGAATTA