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Detailed information on CNT30620999


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H1E4|RAP24_ARATH, E-value = 6e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520678Cajanus cajanSetaria italica8.1320.8883.74123forward
CNT30380859Cajanus cajanManihot esculenta7.6723.4883.62116forward
CNT30631206Cajanus cajanVigna unguiculata10.3837.7483.44157forward
CNT30708948Cajanus cajanGlycine max25.4670.5191.17385forward
CNT30563605Cajanus cajanActinidia chinensis18.1958.1483.64275forward
CNT3085218Cajanus cajanVigna radiata10.4521.2991.14158forward
CNT30251780Cajanus cajanAvena sativa9.2625.3682.14140forward
CNT30176294Cajanus cajanVigna angularis7.0133.8790.57106forward

Expression of CNT30620999

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MPTCFMGMGFGPRKLRVLWLWLFCCCCWLWSWIWAWI*

>peptide 2 (29 aa)
MINRKGFREAGRYREGGGGEGEGKLNHTK*

Sequence

>CNT30620999
GGTGACCCGCGGTAGAGAGATTATACAATATATTGACAGATTATTAGTAGCCCTGCAATTGCCAAAAACTCCATTGCAGTAGCGACCTAAGACCTAGCTA
CAAATATACTATAGACTAGACTAGACTAGACGCATCATAACGATAATAATAAAGTAGCAAGAAACACAGGTTCAGAGAGAATCCCAATCGATCTCATAAG
AGGGGTACTTGTGGAGATTAAAATTATCCGAATCCCCTTCCCACAGCGGTTCGCTGACGTCAGCAAAAGTGAGATCCGAGAGAGGCGAAGAACCTTCGGA
CCCCTCGCTCGAGGAAACCTCAACCTTGCAACAGCTGCTGTTGTCGGAGTGAGGCTTCTCCGGCGGAGGAGCGGCTTTGGATCGCGACCTCTTGGAGGAA
GGCGAAGGCTTCTCAGACTTCCCCTGCTTCTGCAGCTCAGCGAGGCCTTCACAAATGGCCTGGAGCTTGGCGTCAACAGAGGAATGAAGAGGCTTGTACT
CCCCGAAGTCTCCGCCCACCGAGGACCCCTGGTGTCGGAGGTTGGGGAAGTTTAGCCGAGCGAAGTCACCTCGGAGTCTGTAGGCGGCCTTGTCGTACGC
CAGAGCAGCTTCCTCGGCGGTGTCGAAGGTTCCCAGCCACAGCCTCGTACGGTTCTTCGGGAGTCTGATCTCCGCCACCCACTTTCCCCAGTGCCTCTGC
CGAACCCCTCTGTAGAGCTTCGCGGGCTTCGGAGGCATGCCCACGTGCTTCATGGGGATGGGCTTCGGCCCGAGGAAGCTCAGGGTGTTGTGGTTGTGGT
TGTTCTGCTGCTGCTGCTGGCTCTGGAGCTGGATTTGGGCCTGGATCTGAGAGATCTGAGAGGGGGGAAAGTAGTTGGAAGAAGTTGAAGGGAAAGACGG
AAGAGGAGAACAAGGTGAAGAAGAAGAAGGACTCTTCATAAAAGGTTCAAGAACTTCCATTAGTTCACCCCTGAAGGGATCTGAGTGAGCTTTTTCAAAC
TCTATGCTGCTGTAAAAATCCATCATAGCTGCCATCGTAAAACCTGCGTTTTTCTAAAACTGGAGAACAGGTCGTTAAATAAGACTGCCAAATTAAAATT
AAAACCAAAGGATAAAATTCTTTTCTACAAACAAGGATCAAAGAGATTTCTAATAGACAACCTCTTGGGTCTTTGAAAAAGAGAAAGCTTGGAGGGATCA
AAAATAACCCTCTTGGCTTTGTTTGGAAGAAGAAAAAAAATCAAAAAATTGCGACAACAAAAGCTGGATCTCGTTTCTGAAAACACCTGGCCTTCGAGAA
ATCCTTCTAAGTTTGCTTCTAGTTCTTGGTGAGTTTAAAAGACAAACCCAAAAATCATAGCTTGAAAGACAGATGATTAACAGAAAGGGATTCAGAGAAG
CGGGGCGTTACAGAGAGGGGGGTGGGGGGGAGGGAGAAGGGAAGTTGAACCACACAAAGTGAAAGCTGTGAAGAAAATGGAGACAACAAAAATATCTGTG
AGTACCTCTCGC