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Detailed information on CNT30620828


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 5e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641545Cajanus cajanNymphaea colorata84.0221.6587.5184forward
CNT30513785Cajanus cajanJuglans regia84.0229.5884.78184forward
CNT30371574Cajanus cajanArabidopsis thaliana43.3818.3883.1695forward
CNT30618119Cajanus cajanSesamum indicum53.882383.05118forward
CNT3019440Cajanus cajanCitrullus lanatus40.6423.4883.1589forward
CNT30525128Cajanus cajanPhaseolus vulgaris63.9332.4888.57140forward
CNT30629005Cajanus cajanVigna unguiculata76.2628.6491.62167forward
CNT30709011Cajanus cajanGlycine max84.0220.2690.76184forward
CNT3091235Cajanus cajanSolanum tuberosum43.387.9384.2195forward
CNT30188078Cajanus cajanSecale cereale59.8213.5283.21131forward
CNT30298665Cajanus cajanTriticum aestivum47.9516.2383.81105forward
CNT30224070Cajanus cajanHordeum vulgare21.4621.0889.3647forward
CNT30394054Cajanus cajanTriticum turgidum47.9510.6283.81105forward
CNT30562394Cajanus cajanActinidia chinensis76.2626.5182.04167forward
CNT3085970Cajanus cajanVigna radiata84.0224.5791.85184forward
CNT30540845Cajanus cajanBrassica napus50.2323.2184.55110forward
CNT30664555Cajanus cajanTriticum dicoccoides47.9519.8183.81105forward
CNT30313614Cajanus cajanCamelina sativa47.9527.0683.81105forward
CNT3075737Cajanus cajanBrassica juncea47.4912.2683.65104forward
CNT30264705Cajanus cajanBrassica rapa53.4213.9582.05117forward
CNT308929Cajanus cajanZea mays75.3454.8281.82165forward
CNT30716553Cajanus cajanMalus domestica golden47.4915.8385.58104forward
CNT30684883Cajanus cajanTriticum urartu47.9517.4483.81105forward
CNT30579105Cajanus cajanEchinochloa crusgalli59.8212.4183.97131forward
CNT30174403Cajanus cajanVigna angularis84.0226.4792.39184forward

Expression of CNT30620828

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MYRNRNPGVMNSPQCLWSPFTIRCGSPSPPHSNPCFA*

>peptide 2 (71 aa)
PDRNQVAPTHPPDPTRDVQEQEPRRDELAPVPLVPVHDQVRKPIAAAQQPLLRVVVEPPLRGWRRGRAPRRR

Sequence

>CNT30620828
TCCCTGATCGCAATCAAGTAGCTCCGACCCACCCACCCGATCCAACCCGCGATGTACAGGAACAGGAACCCCGGCGTGATGAACTCGCCCCAGTGCCTCT
GGTCCCCGTTCACGATCAGGTGCGGAAGCCCATCGCCGCCGCACAGCAACCCCTGCTTCGCGTAGTTGTCGAACCGCCGCTTCGAGGATGGAGGAGAGGG
CGAGCGCCGCGGAGAAGGC