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Detailed information on CNT30620815


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W3Y4|METK_PHALU, E-value = 1e-78

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Cajanus cajanSetaria viridis24.2122.8485.88177forward
CNT30520816Cajanus cajanSetaria italica24.2120.4985.31177forward
CNT30698521Cajanus cajanQuercus lobata16.6921.7586.07122forward
CNT30374620Cajanus cajanArabidopsis thaliana24.2120.4486.44177forward
CNT3021108Cajanus cajanCitrullus lanatus22.8510.1584.43167forward
CNT30381493Cajanus cajanManihot esculenta23.9423.3687.43175forward
CNT30194995Cajanus cajanPisum sativum22.5717.3384.85165forward
CNT30712616Cajanus cajanGlycine max67.0360.2782.24490forward
CNT30190465Cajanus cajanSecale cereale14.3636.4686.67105forward
CNT30294498Cajanus cajanTriticum aestivum23.6721.6584.39173forward
CNT30225924Cajanus cajanHordeum vulgare22.4429.1382.93164forward
CNT30389985Cajanus cajanTriticum turgidum23.6717.0183.82173forward
CNT30146819Cajanus cajanMedicago truncatula24.2123.5786.44177forward
CNT30437887Cajanus cajanAegilops tauschii22.982483.93168forward
CNT30471290Cajanus cajanSaccharum spontaneum24.2119.7187.01177forward
CNT3013982Cajanus cajanZea mays10.6726.988.4678forward
CNT30681758Cajanus cajanTriticum urartu23.2624.9384.12170forward
CNT30349162Cajanus cajanEragrostis tef24.2119.4388.7177forward
CNT30368062Cajanus cajanSorghum bicolor21.214.185.81155forward
CNT30597069Cajanus cajanOryza meridionalis24.218.8584.75177forward
CNT30358838Cajanus cajanLactuca sativa23.1224.7182.25169forward
CNT30420528Cajanus cajanPapaver somniferum22.028.4586.96161forward
CNT3055182Cajanus cajanAmborella trichopoda22.0215.2385.71161forward
CNT3035650Cajanus cajanCucumis melo22.8512.3983.83167forward
CNT30148817Cajanus cajanBrachypodium distachyon21.8913.8485160forward
CNT30496713Cajanus cajanDigitaria exilis33.2416.1479.42243forward
CNT30113343Cajanus cajanFicus carica12.7226.2787.193forward

Expression of CNT30620815

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MSTPTTIGINNNLPPSETSITVGPTNHKTPRRVQVEDGLLIKVLLRDHR

>peptide 2 (29 aa)
KTFELNTMISRHALVLCIQTETTLFYSIM*

Sequence

>CNT30620815
AAAACATTTGAATTGAATACTATGATATCAAGGCATGCATTGGTGTTATGCATACAAACTGAGACCACGTTATTTTACTCGATCATGTAATAAAAAATTA
CAAATGTAAAAGAACATAGAAGAAACAAAATAGTAAGAGGGGGTGAGAAACACACAGAACAAGAGACGAGGACAGTGTTGATCGAATATTTAGACAGATA
AGGGCAAGCTCAAAAAACTCAAATTTCTTATGCCTTCTCCCACTTGAGAGTCTTGACCACTTCCCAAGTGAAGTCAGGGTCCTCTCTGCCAAAGTGTCCA
TAAGCAGCAGTCTTCAAGAACCTGTTGTTGCCACCCCTCTTGAGATCAAGGTTGATAGAAATCATCCCAGGCCTGAAATCAAAATTCTCCTTCACAATGC
TGAGAATCTCCTTATCAGGAATCTTCCCAGTGCCATAAGTATCAACAAACACAGACAAAGGCTCAGGCACCCCAATAGCATAAGAAACTTGCACAATGCA
CCTCCTTGCAAGTCCACTGGCCACAATGCTCTTAGCAGCTTGCCTCACAATGTAGGGTCCTTCCCAGAGAAGGCACCACCACCATGAGCACCCCAACCAC
CATAGGTATCAATAATAATCTTCCTCCCAGTGAGACCAGCATCACCGTGGGGCCCACCAATCACAAAACGCCCAGAAGGGTTCAAGTGGAAGATGGTCTT
CTCATCAAGGTACTTCTCAGGGATCACAGGC