CANTATAdb - search

Detailed information on CNT30620761

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30542653	Cajanus cajan	Brassica napus	10.97	20.46	92.5	80	forward
CNT30236394	Cajanus cajan	Brassica oleracea	10.97	21.62	92.5	80	forward
CNT3075181	Cajanus cajan	Brassica juncea	10.97	21.92	92.5	80	forward
CNT30261820	Cajanus cajan	Brassica rapa	10.97	25.56	92.5	80	forward

Expression of CNT30620761

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MQFNIQKNDREEVSFDTERAIYVALLLMLTRVALARPTCCCSSC*

>peptide 2 (34 aa)
MCHEMHDGCSLTFKRMIAKKYLSTLKELYMWLCY*

Sequence

>CNT30620761
CACGGGGTAACTATTAAAGCCCAATACTTGTTATTTGCTAGGGTTTATGGTTCGCTATAAATTGATGAAACCTAGCTCGCAGTCGCTTTGAATCTCCTTT
CTTTACCCACCCACAGTCTACTCTCTGTTCGGCTAGGGTTTGTTGTCTGATTTTGTGGTTTATCACTATGAGAGCTAAGTGGAAGAAGAAGCGTATGAGA
AGGTTGAAGAGGAAGCGCCGAAAGATGAGACAAAGATCCAAGTAGTTAGACGATCGGATCCGATGGATACAGCCCGTTCTGTTGTTTTGTCAAACAATAG
TTTATGGTTGCATTTGAGAGAATAACGTGGGTTTCATTAACGTTTTGGCGATTCAGCAAATATCGAGTAAATGTGCCACGAAATGCATGATGGATGCAGT
TTAACATTCAAAAGAATGATCGCGAAGAAGTATCTTTCGACACTGAAAGAGCTATATATGTGGCTCTGTTATTGATGTTAACGCGGGTTGCATTAGCGAG
ACCGACCTGTTGTTGCAGTTCATGCTGATTCTTAGTGCTAGAAAGACGTCTGTGCGACTGTTATTCGTTAATTTGTTATTGGATTAAAAATTAAGGTTGA
TCAGTATTGTCAGTTTTAAAGTAACAAAATTATAGGTTAAATTGTTATTGGATTTCTCAAAACTATTTTTTCAAATATAATCCAAATGTAGCCGGAGGGT
TGAATTAAAAATGCAATAAATTGTGCAAA