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Detailed information on CNT30620437


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697810Cajanus cajanOryza sativa16.2720.4687.93116forward
CNT30615807Cajanus cajanSesamum indicum13.644.2983.5197forward
CNT3043803Cajanus cajanPrunus dulcis18.372590.08131forward
CNT30295032Cajanus cajanTriticum aestivum16.9723.1885.95121forward
CNT30562499Cajanus cajanActinidia chinensis17.2555.4191.06123forward
CNT3083687Cajanus cajanVigna radiata22.0216.5189.17157forward
CNT30555324Cajanus cajanOryza glaberrima19.7838.4283.69141forward
CNT30721366Cajanus cajanTriticum spelta19.6427.2482.86140forward
CNT30120766Cajanus cajanCitrus clementina18.3724.2187.02131forward
CNT30151313Cajanus cajanBrachypodium distachyon16.8325.3290120forward
CNT30104226Cajanus cajanOryza rufipogon19.6429.2983.57140forward
CNT30118078Cajanus cajanOryza nivara19.6422.2983.57140forward
CNT30176592Cajanus cajanVigna angularis22.0219.2691.72157forward

Expression of CNT30620437

Peptides detected in this lncRNA

>peptide 1 (39 aa)
DKIPHLWNITWFQLCEFTSTIAITTPMHTNRFQYRKNQL*

>peptide 2 (43 aa)
RQNPSSVEHYMVPTLRVYINHRNNNTNAHKSIPIQKEPTIIKP*

Sequence

>CNT30620437
AAGACAAAATCCCTCATCTGTGGAACATTACATGGTTCCAACTTTGCGAGTTTACATCAACCATCGCAATAACAACACCAATGCACACAAATCGATTCCA
ATACAGAAAGAACCAACTATAATTAAACCATAAATATACCGTAAAACGCAACAAAACCTAGCTTTAGGATTCAGCGCAATAGAAGCACCAATCCAACCAC
AAAAAGATAGTACCCAAACAATTATATTTAAAGTAATGACATAACTTAAACTTGCCTAAAACATAATCATATAACTGTATCCAAAATTCGATTAAACAAC
TCAGCGCAAAACAAATAACAGAGTACTGGAACAACAACTTATGACAGTAACATAAAAAGATAAAGCGAAAATCAACGGTAGGATTTCTGGAACCTGGCGC
GAGCACCGCGACCTCCGAACTTCTTTGGCTCGCAGCGGCGGGGATCGGCGACGAGTGCCTTGGCGATGCTCTGGCGGATGGCGTAGATCTGGGAGGATTG
GCTCGAAGGCCTTGAAGCGGAGGATCTCCGGCTCCACGAGCTCGATCGGACAGCCGTTGATCTTGATGAGGCCTCGGCCGCGCTTGCAGTAGGTGACGGC
CACCGCCGTCTTCTTCCGGCCGAAGCACTGGACTTGCTCGATTGCTGGCACCTGCGCCATTGTCGCCGCTAGGGTTTGGGTTTGGGTTTGGGTTTAGGTT
TTCACTGCGCCTC