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Detailed information on CNT30620323


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 7e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673014Cajanus cajanSetaria viridis12.2639.5381.28219forward
CNT30520920Cajanus cajanSetaria italica12.2631.681.28219forward
CNT30533721Cajanus cajanEucalyptus grandis17.845.5678.93318forward
CNT30516978Cajanus cajanJuglans regia11.1429.1884.42199forward
CNT3021623Cajanus cajanCitrullus lanatus21.7728.6578.92389forward
CNT30730016Cajanus cajanCorchorus capsularis9.1224.6282.21163forward
CNT30629841Cajanus cajanVigna unguiculata13.2140.3485.59236forward
CNT30712228Cajanus cajanGlycine max20.4371.7189.86365forward
CNT3042792Cajanus cajanPrunus dulcis7.1134.4286.61127forward
CNT30635301Cajanus cajanCapsicum annuum11.5351.8981.07206forward
CNT30294278Cajanus cajanTriticum aestivum7.4430.8681.2133forward
CNT30560479Cajanus cajanActinidia chinensis12.220.783.94218forward
CNT3084834Cajanus cajanVigna radiata16.6877.489.6298forward
CNT30172563Cajanus cajanTrifolium pratense15.6741.2487.14280forward
CNT30249180Cajanus cajanAvena sativa6.4920.0381.9116forward
CNT3075006Cajanus cajanBrassica juncea5.9923.7883.18107forward
CNT30614377Cajanus cajanArabis alpina5.653984.16101forward
CNT30454500Cajanus cajanSaccharum spontaneum7.7238.1281.16138forward
CNT30135064Cajanus cajanLolium perenne10.2432.0580.33183forward
CNT3014188Cajanus cajanZea mays11.0225.7980.2197forward
CNT30610860Cajanus cajanGossypium raimondii4.8729.4985.0687forward
CNT30129085Cajanus cajanCorymbia citriodora12.3720.9978.73221forward
CNT30344813Cajanus cajanEragrostis tef12.2641.8781.28219forward
CNT30360227Cajanus cajanLactuca sativa13.8845.579.44248forward
CNT30644515Cajanus cajanCannabis sativa20.7164.0180.54370forward
CNT3027985Cajanus cajanTheobroma cacao12.7641.9979.39228forward
CNT30578384Cajanus cajanOryza barthii6.3228.8384.07113forward
CNT30582394Cajanus cajanEchinochloa crusgalli6.4931.182.76116forward
CNT30557050Cajanus cajanPanicum hallii7.5535.5383.7135forward
CNT30726870Cajanus cajanLupinus angustifolius12.8122.786.9229forward
CNT3049140Cajanus cajanCucumis sativus9.9655.879.78178forward

Expression of CNT30620323

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MGQLGGSRGPSPPQFLLVVGSLRFCMREGWINLLE*

>peptide 2 (42 aa)
MPYIVRQMLRITTSPPAAREPAAPAYSVFLRGPAFTNGPTRR*

>peptide 3 (38 aa)
MHPNNILHQLKHYSITLAVASSPNILISPSITNSLVSY*

>peptide 4 (51 aa)
MALTVKVNCLLEGKIWRGEEAERPLGETRVLVKVDLSWLAIGEAAAMALCC*

Sequence

>CNT30620323
TCACAAATTCCATTAAGAGATGATCGGAAAAAGATAGAGAAATTAACATAGTAACATGGTGAGAGTCGTCATAAAATACATCATATACATCCATCTCTAT
TGCACAAATAAGCATCCATTCATTGCCCATTCATAGAGAATGAATACAAAAAACAAACAAACCTAAGTACTTCACTTAATGTAGTATGGAAGGTCCAACA
CATAGAGGAGGAAGTAGGCCCAAATAACGCCAGAAATGCCTCCAAAGAAGAACCCACCAGTGAACTTGGCCCAACCATCAGCGGTTTGGAGCTGATCGGG
CTCCTTCTTGCGGCCCGTTAAGGTCAGTGATGGGGCAGTGGATGGGTCTCCTTCGTTGAAGGATGCAATGCCGTACATTGTGAGGCAAATGCTGAGGATC
ACTACAAGCCCACCGGCTGCGAGAGAGCCCGCTGCTCCAGCGTACTCGGTGTTCCTTAGAGGCCCGGCCTTCACGAATGGGCCAACTAGGAGGTAGCCGT
GGGCCAAGCCCACCTCAATTCCTCTTAGTAGTGGGCTCACTGCGGTTCTGTATGCGGGAAGGTTGGATAAATTTGCTTGAATAATGAGTGAATTAAAATA
AACGCAATTCATGTATGATCCGTTAAAATTAATCAAAAGAAAAGTGCCAACAAAACATGATTCATTCATGATCTATTTCATAAAATAAAAAATCAATTTA
TCTACTGAAAACTTTTTTATGTATGAATATTTTTCAATTTTTTTTAATGATTTCATGTTGGGGTTTATTTTAGGATAAAACTTAACTTTAAATACTTTTA
ATATTGTTTTCTAATTAGAATTATTTCATCTCAAGCATAATAATTGTTTTTGTTTTATTAAAGATCAATATAGACTATTAAGATAAAAATTTAAATTTCT
GATTGAATATTAAAACCACTTAAGAACCTAATGCATCCCAATAATATTCTACATCAATTGAAGCATTATTCCATTACACTCGCAGTTGCATCAAGTCCCA
ATATATTAATATCACCATCTATAACCAATTCATTGGTTTCTTATTGAATATAATCATCTTGGGATTCATTTAATGAGATGAAACAAGTCTGGTGGCCTTC
AATTAATTGGAATTTAAATTTGGATGTTCATAATCCACATATTGATCTTTAATGTAACATTTTATAACATAGATTAGCAAAGTGAACTTGAAAAAATAAC
ATAAAAGTCCTAAGGAACAAAATGTAAGTTTTGTTTTTTTTGTATATAATACTACACTATACTATGTGATGTGTTTCTATCCTACCATTACAGAGATGTA
GTGTGTTAACCAATTACTCGGGTGTATGTAAGTCAGATACCTGATAACACATCCATAATCAAAATTATACATTGCCACAATCTATATTAACATATTAACA
TTCCTCGTATATATTTTCATAGAAAAAATAAAAGGGTCATCCATAGTTGCACATAGATAGGACAATGGTTAGAATTAGAAAAGGTGAAAGAGAGTGAGAA
GTGTACCTTTTCAGATTGGATGGCCTTGACAGTGAAGGTAAATTGCCTTCTAGAGGGCAAGATTTGGAGAGGTGAAGAGGCAGAGAGACCCTTGGGTGAG
ACAAGAGTCCTAGTGAAGGTGGACTTGAGTTGGCTTGCCATTGGAGAAGCAGCTGCCATGGCCTTGTGTTGTTAGTTAATACTACTACACACAGTGAGGG
ACCTGAGTGGCTAAGTACTTCCATGGCTAAATGCAAGATCAAGGTTGTGGCTGTGGATGCCCCTCTCATCCCATTGGCAGATATGCA