Detailed information on CNT30620290


BLAST search results

BLAST vs Swiss-Prot:
sp|Q945B7|CRD1_EUPES, E-value = 1e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522654Cajanus cajanSetaria italica21.7418.0689.2365forward
CNT30640917Cajanus cajanNymphaea colorata25.759.0989.6177forward
CNT30729941Cajanus cajanCorchorus capsularis20.49.9390.1661forward
CNT30524694Cajanus cajanPhaseolus vulgaris53.1856.5891.19159forward
CNT30479309Cajanus cajanArabidopsis halleri38.4625.6784.35115forward
CNT30363833Cajanus cajanSorghum bicolor21.747.3689.2365forward
CNT30360397Cajanus cajanLactuca sativa43.8131.7281.68131forward
CNT3099936Cajanus cajanOryza rufipogon46.8227.8981.43140forward
CNT30574872Cajanus cajanOryza barthii29.4314.6484.0988forward
CNT30497686Cajanus cajanDigitaria exilis21.7418.2689.2365forward
CNT30557967Cajanus cajanPanicum hallii21.7412.9789.2365forward

Expression of CNT30620290

Peptides detected in this lncRNA

>peptide 1 (98 aa)
FSSARPLKELNKDLSEGTLKFVSSFLELLVPDKVCLVVVSLELLEQCLKLSLVEGLHLIKVSGVEPWCQKGLLDGTLVPLLAFLCGWWWGGSGRHSYAA

>peptide 2 (37 aa)
SAVQDLSRNSTKICLRGPSSLSAASLNSLFLTKCVWL*

Sequence

>CNT30620290
TTCAGCAGTGCAAGACCTCTCAAGGAACTCAACAAAGATCTGTCTGAGGGGACCCTCAAGTTTGTCAGCAGCTTCCTTGAACTCCTTGTTCCTGACAAAG
TGTGTCTGGTTGTAGTCAGTCTTGAACTCCTGGAGCAGTGCCTCAAACTCAGCCTGGTTGAGGGTCTCCATCTCATCAAAGTCAGTGGTGTAGAACCTTG
GTGTCAGAAGGGTCTCCTTGATGGCACTCTTGTTCCCCTTCTTGCTTTCCTTTGTGGATGGTGGTGGGGTGGCAGTGGCAGACATTCTTATGCTGCTGC