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Detailed information on CNT30620238


BLAST search results

BLAST vs Swiss-Prot:
sp|P84977|GRP3_POPEU, E-value = 1e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526705Cajanus cajanPhaseolus vulgaris21.4646.0488.37215forward
CNT30632012Cajanus cajanVigna unguiculata21.1648.0789.62212forward
CNT30710461Cajanus cajanGlycine max42.8163.3785.78429forward
CNT30724703Cajanus cajanLupinus angustifolius13.6742.6883.94137forward

Expression of CNT30620238

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MLRPSRFWPFIPSIASFIDCSDAKVTNPKPLDLPVSRSLIICKLKHAHQSNPKQSSRENKFKTE*

Sequence

>CNT30620238
ATTATCTAGCTGTTCTTTATCGTTTTTTCTTTAGGGCTGATTCACACCTTGCATTCAACAAATAAATAAATAAAAACATTTCGAGAGCAAATAGAGTAAT
TCCGCCACAAAAACTTTAAATTCTGTTGAAATTTGATACTCTAATTTCTAATTTTCTGGCTAGCATATCTTTTAATCAATTATTATACACAACCAGATTT
GAAGGTAAAAGACGAGAACAGGGGACATTGAACCGGGAACAGGAAACCAAGACAGATACTTAAAACCAAACCACACCGTCTAAATATTACTCGATACAAC
CATAAACCCTAATCTAAGACATCAATCACCAGCTACCCTCAGCACCACCATCACCACCGCGGGAGTAGCGTGAACCACCATCACCATAACCACGGTCTCT
GCCACCGCCATAGCCGCCGCCGCCGCCGCCATATCCACCACCACCATTACGGTTGTATCCACCTTCACGACGACCACCACCATATCCGCCGCCGCCACCA
TATCCACCACCACCGCGGTTGTATCCACCGCCACCACCGTAACCACCGCCACCGCGGCTGCCGCCACCACCGCTGCCACGAGACTGAGCCTCGTTGACAG
TGATGTTACGGCCGTCAAGGTTCTGGCCGTTCATCCCTTCGATCGCATCTTTCATTGACTGCTCAGACGCGAAAGTCACAAATCCAAAACCTCTGGATCT
TCCAGTCTCACGATCGTTGATAATCTGCAAATTAAAACACGCACATCAATCAAATCCAAAGCAAAGCAGCAGGGAAAACAAATTCAAAACCGAATAGAAA
CCGATCGATCTTCTCCTTTGGTTAAAAGACGAAGATGAACGTACCTATTGGCGTGAGTAATAAAAGAATGATATAGTAACAGAAGAAGTATCATAGATCA
AGTAACGCAAATAGATCAGATATGACAGATTAGAACGGGATCGTGAAATTCCGAAACCGAATCGTGTCAGATCAGATGCGATGCCTGCAACAAACGGACC
TT