Detailed information on CNT30620193


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 3e-103

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513636Cajanus cajanJuglans regia71.1869.7787.96457forward
CNT30699961Cajanus cajanQuercus lobata71.543.3887.36459forward
CNT30616366Cajanus cajanSesamum indicum69.4752.4786.32446forward
CNT30727313Cajanus cajanCorchorus capsularis71.1864.1986457forward
CNT30506303Cajanus cajanNicotiana attenuata71.1855.9485.78457forward
CNT3088000Cajanus cajanVigna radiata72.5941.7989.48466forward
CNT30608663Cajanus cajanGossypium raimondii71.1858.9785.56457forward
CNT3025169Cajanus cajanPopulus trichocarpa67.666.1686.18434forward
CNT30176450Cajanus cajanVigna angularis72.7442.4591.65467forward

Expression of CNT30620193

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVRVLTNICMPPRRRRTRWRVDSFWML*

>peptide 2 (46 aa)
EGIHGYKVFHKNIKKQIYSNGYKVVHKTIKKQIYSKGRLKPIRPKF*

Sequence

>CNT30620193
GGAAGGCATTCATGGATATAAAGTATTTCACAAGAATATAAAGAAGCAAATTTATTCTAATGGATATAAAGTTGTTCACAAGACTATAAAGAAGCAAATT
TATTCCAAGGGCCGACTGAAACCAATACGGCCCAAGTTCTGAAATTTAAAGACACCATCACAGAAAGAGCGAACACTTAAAAGCCACCACGGAGACGCAG
GACAAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGTCCATCCTCAAGCTGTTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGG
GGGATCCCCTCCTTGTCCTGAATCTTGGACTTTACGTTGTCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCGGTGAGGGTTTTGACGA
ATATCTGCATGCCACCACGGAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGCCCATCCTCGAGCTGCTTCCC
GGCGAAGATCAGACGTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCCGAACTCTCCACCTCCAGAGTT
ATGGTCTTACCGGTCAGAGTCTTAACGAAGATTTGCATCTAC