Detailed information on CNT30620158


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-101

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728104Cajanus cajanCorchorus capsularis64.6335.5785.05455forward
CNT30525067Cajanus cajanPhaseolus vulgaris66.0569.9291.83465forward
CNT30628664Cajanus cajanVigna unguiculata67.0539.788.98472forward
CNT3025196Cajanus cajanPopulus trichocarpa66.0565.8685.38465forward
CNT30120441Cajanus cajanCitrus clementina64.9141.8584.9457forward
CNT30723825Cajanus cajanLupinus angustifolius64.9152.1786.87457forward
CNT3050944Cajanus cajanCucumis sativus65.7747.9884.45463forward

Expression of CNT30620158

Peptides detected in this lncRNA

>peptide 1 (58 aa)
LYFKAHSIDIKMEGIHGYKVFHKNIKKQIYSNGYKVVHKTIKKQIYSKGRLKPIRPKF*

Sequence

>CNT30620158
TTATATTTCAAAGCACATTCAATTGATATTAAAATGGAAGGCATTCATGGATATAAAGTATTTCACAAGAATATAAAGAAGCAAATTTATTCTAATGGAT
ATAAAGTTGTTCACAAGACTATAAAGAAGCAAATTTATTCCAAGGGCCGACTGAAACCAATACGGCCCAAGTTCTGAAATTTAAAGACACCATCACAGAA
AGAGCGAACACTTAAAAGCCACCACGGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGAATATTGTAGTCAGCAAGGGTCCTCCCGTCTTCCAACT
GCTTCCCTGCAAAGATCAGCCTCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGAATCTTGCCCTTCACATTGTCAATGGTGTCTGAACTCTCCACCTC
AAGGGTGATGGTCTTCCCCGTCTAGGTCTTGACAAAAATCTGCATGCCACCCCTGAGACGCAGAACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAG
TCGGCGAGGGTCCGCCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGACGTTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAATCTTGGCCTTCACAT
TGTCGATGGTGTCCGAACTCTCCACCTCCAGAGTTATGGTCTTACCGGTCAGAGTCTTAACGAAGATTTGCATCTACACCAACAGCAGATAAATCAAAAT
CAAT