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Detailed information on CNT30620100


BLAST search results

BLAST vs Swiss-Prot:
sp|P33079|A10A5_SOYBN, E-value = 3e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709978Cajanus cajanGlycine max23.8630.0488.44225forward
CNT30144937Cajanus cajanMedicago truncatula10.8224.5886.27102forward

Expression of CNT30620100

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MCYLMGSSERQGSLRFTWYVLDRLPGDYLSSSRFCLWKRP*

>peptide 2 (46 aa)
MQNCLLYNVCLNHSNPMLILCRTMSTIACSSMKLLYLRTNLPCREL*

Sequence

>CNT30620100
GTTCAACATTTTGGGATCCGTGTCCAACTTCATAGACTGAAGTACAATGTGCATTCATAATTAACAGCCACAATCAGGTTTAGGAAAGCTAATCTATATC
ATCACCATAACTACTTAATAGATAGCATTTCATGCAAAATTGGCGGCAGTACCACATTATGTGAGGCAATATGCAAGATGGTCATCCTGTTTGTGCAGTA
TGTGTTTTAATTCATTCAGATAGAAAAAAAAATTAAGAATAATATAAATTCAGAATAACTGTTTGGTTGGTCGTCTTGTTACTTAATAGATAGCATTTCA
TGCAAAATTGCCTGCTGTACAATGTTTGTCTCAACCACAGCAACCCTATGTTAATCCTCTGCAGAACAATGTCGACTATAGCATGTTCAAGCATGAAGCT
ACTATATCTAAGAACAAATCTTCCTTGCAGAGAATTGTGAGACCTCCCATAGGATGATTGTAGCCGAACTCGTCTTCAGCTTGTTTTAGCAATTCTTGAA
ATAAAGGCTGGTTCAAGAATGATATGGGAATCATTTTGTCTCCAACATAGCCTTTTGGGACTTCCACAACCTTGTTAGCTGCTTGGCATGTAATTGTAAA
TGATGTCCGTCTTCCAAGTAAGCGAAGGCCCATTGTTTTTGCTATTGCACACAAAAAAGTACAGAATGATCTCAAAGAACTAGTAAAAGAATGCAATGAA
TTTGAATTCTGCTGATTCAGTGTAAGAATGAATGACTTGTACAGCTTGTATGCTCAATGACAGATACACACATACATAGATAGATAACCAAGTCTTTCTC
TCTTGAATTGGATTGTGAATGTGCTATTTGATGGGGTCAAGTGAGAGACAGGGGTCATTAAGGTTCACATGGTATGTCTTGGATAGGTTACCAGGAGATT
ACTTGAGTTCTAGTAGATTCTGCCTATGGAAAAGACCTTGATG