Detailed information on CNT30620093


BLAST search results

BLAST vs Swiss-Prot:
sp|P33083|AX6B_SOYBN, E-value = 1e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315050Cajanus cajanCorylus avellana17.6733.2782.94170forward
CNT30381249Cajanus cajanManihot esculenta16.8448.6586.42162forward
CNT30526635Cajanus cajanPhaseolus vulgaris24.1238.2891.38232forward
CNT30198235Cajanus cajanPisum sativum19.852286.39191forward
CNT3044405Cajanus cajanPrunus dulcis19.2325.5983.78185forward
CNT3090109Cajanus cajanSolanum tuberosum11.1225.5482.24107forward
CNT30560987Cajanus cajanActinidia chinensis18.0934.2585.06174forward
CNT3084441Cajanus cajanVigna radiata36.3831.5688.57350forward
CNT30171655Cajanus cajanTrifolium pratense29.9437.684.38288forward
CNT30648720Cajanus cajanRosa chinensis19.4425.9486.1187forward
CNT30716451Cajanus cajanMalus domestica golden12.3728.6183.19119reverse complement
CNT30644712Cajanus cajanCannabis sativa9.7725.1386.1794forward
CNT30174654Cajanus cajanVigna angularis24.6446.0288.61237forward
CNT3051199Cajanus cajanCucumis sativus13.131.985.71126forward

Expression of CNT30620093

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLEDIFTARNCEATHGMIISKFFLSLAQQILE*

>peptide 2 (38 aa)
MGEVVNIVIDKQKHLAIEFVVITQKLVTIVTGQRIRLL*

>peptide 3 (39 aa)
MKVGSSMTLESQIASFSLQHRLQDSPLELLRILKLLGWL*

Sequence

>CNT30620093
GTTTAACAAATCAAAAAACCAAAATAAGGGATGATCTCTTACAAAATTGAAATGAGTATGATTATGAATATAATCTTCACGCAGTTGAACTAAACCATAC
GTCAAATGAATATGAAATTTCTTTGGTCATGGATGTTATTCATTGAAAGTAATGGGAACAATAAGCCTTCATATTAAGTCCACTATAACTACCTTGGCAG
TTGGCAGGGGCGAAATCTCATGTATCATTTGAACCCAGAATTTTAATTTTGTGTGTTAATTTTGTAAAATTTAAGAATCTTTCAAACCCTTCTCAAGTAA
ACTGATGCTTCTCTAATACCGTAAGCTCTGTTCTGCCCTCTCCTGACCTTCTCATTCTGTATACCATTCAAATTGCAGGGATGGGTGAAGTAGTGAACAT
TGTAATTGATAAACAGAAACATTTAGCAATTGAATTCGTTGTCATTACTCAAAAATTGGTAACAATTGTTACAGGTCAGAGAATACGCCTATTGTAAAAA
ATTTCTCAACTAATCTATGTCAGTCTCCTAAAGTGTGAGCTTTATTGTCCATTCAAGCGAGAAGTTATATGTTGGAAGACATCTTCACTGCAAGGAATTG
TGAGGCCACCCATGGGATGATCATATCCAAATTCTTCCTCAGCTTGGCACAACAAATCTTGGAATGAAGGTTGGTTCAAGTATGACACTGGAATCACAAA
TCGCTTCATTTTCTCTCCAACATAGACTGCAAGATAGCCCTTTGGAACTTCTACGGATTTTGAAGCTGCTTGGCTGGTTGTGAATGATGCCCGTCGAATA
GCAAGCAAATGGAAACCCATTTTGTGTGCTTGTTTGAAGGAAGAAGAACAAGGCAGAGATCTCAGATCTACGAATATATCTGATACTCGATGAGTCCAGT
GACTTGGGTTGTTTGTGAAGGTAAGAGGAAGAGTATTTATAACTTTCAAAATTATATGGAAA