Detailed information on CNT30619934


BLAST search results

BLAST vs Swiss-Prot:
sp|P25818|TIP11_ARATH, E-value = 2e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373597Cajanus cajanArabidopsis thaliana32.4926.8583.23167forward
CNT30727223Cajanus cajanCorchorus capsularis24.99.1288.28128forward
CNT30382128Cajanus cajanManihot esculenta18.4824.3685.2695forward
CNT30708635Cajanus cajanGlycine max36.3832.8690.91187forward
CNT30543529Cajanus cajanBrassica napus23.1512.583.19119forward
CNT30239005Cajanus cajanBrassica oleracea23.1511.9182.35119forward
CNT30310654Cajanus cajanCamelina sativa26.2634.3582.22135forward
CNT30612709Cajanus cajanArabis alpina26.0712.5980.6134forward
CNT30423726Cajanus cajanPapaver somniferum26.6510.0581.75137forward
CNT3050792Cajanus cajanCucumis sativus23.3512.0287.5120forward

Expression of CNT30619934

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MIKNSMRIEKKKERSGVAQEYKQADPNDDTFKFQWWTKGVKIIKLKRREHGFNRNEKHKEGKA*

>peptide 2 (63 aa)
MRGPTQQNVSANDETNCDGSNSSQTALLGVNGCSVHRVHQPKGHHDLQHQSVPHANSSGEPESW

>peptide 3 (55 aa)
MLAPTMKPIAMGAIVPKLPFLGSTAVAYTVYTNPKVITISNTKAFPTPTPAESPKA

Sequence

>CNT30619934
GCATGGTAAAGCTTTATGATTAAGAATTCAATGAGAATAGAAAAAAAGAAAGAAAGAAGTGGAGTGGCACAAGAGTACAAGCAAGCAGACCCGAATGATG
ATACATTCAAATTTCAATGGTGGACCAAGGGAGTGAAAATAATTAAACTTAAGAGAAGAGAACACGGATTCAACAGGAATGAAAAACACAAGGAAGGAAA
AGCATAGACAGAAGAAATTCAATAATACAGAATTAAGAGTCTAGTAGTCAGTGGTGGGGAGCTGCTCGTGGGTGTGGCTGATGAAGACGACCTCGTAGAT
AAGCCCAGCGAGCCCACCACCGATGAGAGGCCCCACCCAACAGAATGTTAGCGCCAACGATGAAACCAATTGCGATGGGAGCAATAGTTCCCAAACTGCC
CTTCTTGGGGTCAACGGCTGTAGCGTACACCGTGTACACCAACCCAAAGGTCATCACGATCTCCAACACCAAAGCGTTCCCCACGCCAACTCCAGCGGAG
AGCCCGAAAGCTGG