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Detailed information on CNT30619843


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40396|MT2_NICGU, E-value = 3e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3073023Cajanus cajanQuercus suber3.6525.4789.7168reverse complement
CNT30712346Cajanus cajanGlycine max6.0730.2988.5113forward

Expression of CNT30619843

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MKFIYLSNFITDGSNKCQILHKIIVNQLNSSSLKFLNPSSRVLVLEYEEYHHTVYDCNLHDWGKIKFSDTHMDIINVI*

>peptide 2 (46 aa)
MHVFNNVLFSKQNNNNYYIICHLSLKGRISSSIVVHEIHIFIQFHH*

>peptide 3 (52 aa)
MKVKLTTISKMNKGTNHDPRCMCLTMYCFQNKIIIIITLFVTFHSKEEYLPP*

>peptide 4 (42 aa)
MSCERKLNKGSGDQNIPTQENKQSILFSCNSTKRVPEKPLKI*

Sequence

>CNT30619843
CGGAAATAAAGTAAAAGAAGATTACAAATTACAGAATGAGGATCAATAATTCAACATTGTTCGTAAAGAGCCACACGTATCCATCACAATACTAATCTGC
CAAACAGCCACACGTATCCATCACAATACTAATCTGCCAAACACGCACATGAAAGTGAAACTCACAACCATCAGCAAAATGAATAAGGGGACCAACCATG
ACCCCAGATGCATGTGTTTAACAATGTATTGTTTTCAAAACAAAATAATAATAATTATTACATTATTTGTCACCTTTCACTCAAAGGAAGAATATCTTCC
TCCATAGTTGTTCATGAAATTCATATATTTATCCAATTTCATCACTGATGGAAGTAATAAATGTCAAATATTACACAAAATTATTGTTAATCAACTTAAC
AGTTCTTCATTGAAATTCTTAAATCCGAGTAGTCGTGTTCTTGTTCTTGAATACGAGGAGTATCATCATACAGTATATGATTGTAATTTGCATGACTGGG
GAAAAATAAAGTTCTCAGATACTCACATGGATATCATAAATGTTATTTAGGATTTGTGACCACCATGTCTAAGTTTCATAAAAGGAAAATCACATAAAAC
AAACGCCACTTTCTTCTGGTAACATAATATCATAAGCAGAGATTGATAATTCTAATGAGCCAACTTCATACAGAACCCATGACAAGTCCAGAACATTTGA
ACATGTCCAAGGGCACAACATGACCACTTTATTCTAAGGGTGTTTCAACACCAGAGTGCACGAAAACAAACACAAACGTACATAATTTTAAGTTCTTATA
AGTCTTAACTAGGAGTTATTATAATTCCTGCCTCTAATGGGGTAATTAGGGACATCTCTGCTAACTAGAAGCTTTGACTTTTGAACCCTCACTTGCAATT
GCAGGGATTGCAGCTGCAACACCCATTTCAGCACCCTCCATCTGAGTCTTCACTGTTGCCACTCCCATCACCAAGCTCTCAGTGGTTGTTTGCTCAGTGT
AGCTCAAGTCTGGGTACATCTTGCAGCTGCACCACAAATATTAAGAAAAAAGAAAAAGAAAAGAACAAAAAAGTCTCAGTGAAATTAATTTACACAACAC
AAACTCAAAAGGGAAAGATCGTTTCATGTGAAAAGAAAATCCTTGTGTCTCTTTATTCTTAAAAGTGCACAAAATATAAAGAATAAGGTCGTCCATCTAT
GCCATGATTATGTGAATGTTTCAGGACACCCAGAAACATTTTTCTAAACCTGAGGAGTTTCTAAGGAGCAAAGGTTAACAAAAAGGGTACCATAAAAGCC
AAGCAAAATCAAAACATGGTGATCTTTACCCAAGTTAAAGAAACCCTCAAAGGGATCAGAATTTAGCTCACGGAAATTAACCCATGTAAGAAAAAACTCA
AAAGAATTGTTTTTTACACAATTCACCAAAAAGGGTGCCCAAAAAGCCAATCAAAACACGCAAAAACTTGAGGTGAAAAATAAAATTTGACATGTCCTGT
GAGAGAAAATTAAACAAAGGTTCAGGTGATCAGAATATCCCCACGCAAGAAAATAAACAAAGTATACTTTTTTCATGCAATTCAACCAAAAGGGTACCCG
AAAAACCATTAAAAATCTAAAATAAAAATAAAAATAAAAATAAAAATTCTCGGAAAACCTCCATTTTCCGTGAAAGAAATGAAAATCGCACTCACCCTCC
GCAGCCACTGCCGCACTTGCAGCCACTTCCGCAACCACAGTTACCACCGCAGCAAGACATTTTGAGGTGAGAGAAAAACCGAACACAGAAGAAAAGAAGA
TAACGACGAGGAGGAACAAGTTACAACACCGAAACTATTATTACACACACTGGAACGAGTTT