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Detailed information on CNT30619421


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021668Sesamum indicumCitrullus lanatus73.8638.1995.38975forward
CNT30506509Sesamum indicumNicotiana attenuata73.8666.6496.21975forward
CNT30628227Sesamum indicumDaucus carota67.4299.3394.94890reverse complement
CNT30724960Sesamum indicumLupinus angustifolius70.6894.6294.32933reverse complement

Expression of CNT30619421

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MQPQSGGKFRPRLNTGERPIANKYRKGKMKRTLKRESKSA*

>peptide 2 (40 aa)
MNRKPGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 3 (33 aa)
MCASQRASKPVRRKEADRRDPPRGVQRRPTLIF*

>peptide 4 (41 aa)
RANREQPNLRIGRLRCPDCSLEKRPQRRTGPKSPGKGRRRG*

Sequence

>CNT30619421
GGCGAGCGAACCGGGAACAGCCCAACTTGAGAATCGGGCGGCTTCGCTGTCCGGATTGTAGTCTGGAGAAGCGTCCGCAGCGGCGGACCGGGCCCAAGTC
CCCTGGAAAGGGGCGCCGGAGAGGGTGAGAGCCTCGTCGTGCCCGGACCCTGCCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGC
CCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCAAGGGAAAGATGAAAAGGACTTTGAAAAGAGA
GTCAAAGAGCGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGCGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGT
GCGAGTCAACGGGCGAGCAAACCCGTAAGGCGTAAGGAAGCTGACCGGCGCGATCCCCCCCGAGGGGTGCAACGCCGACCGACCTTGATCTTCTGAGAAG
GGTTCGAGTGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTG
ACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGC
TCGAGCGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTCTTCTCAAACTTTAAATAGGTAGGACGGCGCGGC
TGCTCCGTTGAGCCGCGCCAGGGGATCGAGAGCTCCCAGTGGGCCCTTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTG
CCCAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACA
ACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGGGCCAGGCCCCGATGAGTAGGAG
GGCGCGGCGGTCGCCGCAAAACCCTGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCGGGTCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGA
AGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAAGCCCGACAGACAGCGCGTTCAGCGCGT
GCTCCGAAAGGGAATCGGGT