Detailed information on CNT30619403


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378672Sesamum indicumArabidopsis thaliana2.3140.3987.882reverse complement
CNT30605041Sesamum indicumGossypium raimondii21.381.0393.52756reverse complement

Expression of CNT30619403

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MSCIRTISLSRELHFLKRDERWHNLSYTINCEQGFKRFWRSRNYRLT*

>peptide 2 (49 aa)
SHKVSSVPRPVIFFCVATAELIGAWVSPEYCSLIFFAVLLLLFKSRCQS*

>peptide 3 (68 aa)
MITHTWMLPDTATLTLFGERNGMVSLSTSVVAETSKKENFSARSFSSSPLLLLRLSAHRESCPLPWSP*

>peptide 4 (40 aa)
MQKKTKRDWISTHKEGRLDTFDRVVFLVEMGWCSNSRNAV*

>peptide 5 (39 aa)
MIVEIPHYPCCNSCGSSMQFDLLHLNHPPYRKILSMTDV*

>peptide 6 (35 aa)
MRRTSKKNAVKLCAVRRRCERSEGSEGLGELYVRS*

>peptide 7 (35 aa)
MQSRQWAPPFLTRLTRGRVNLLRSMLHNHSFVLTK*

>peptide 8 (33 aa)
MKGGITCPIQSIVSRDLSDSGGVEIIVLPESSP*

>peptide 9 (33 aa)
MLGLVLLIIFDHSEVLVSSASSISFLGIFSRTE*

>peptide 10 (30 aa)
MIGSTMQKWVSPTIFRKATHKQTWTVSRII*

Sequence

>CNT30619403
AGTCTCACAAGGTCTCCTCTGTACCACGTCCCGTTATCTTCTTTTGTGTAGCTACCGCTGAGCTGATTGGAGCTTGGGTTTCGCCCGAGTATTGTAGTCT
TATATTCTTTGCTGTATTGCTACTTCTTTTTAAGTCAAGATGCCAGAGCTAACACAAGGCAAAAGCACTTGATCAAAACGTGATCGAAGATATCAAAAGA
AAGGGAAACCATATGATCACACATACGTGGATGTTGCCTGACACAGCTACGCTCACGCTCTTTGGCGAGCGCAACGGTATGGTGAGTCTTTCTACCAGCG
TTGTTGCCGAAACTTCTAAGAAAGAGAACTTCTCAGCTCGTAGCTTTAGCTCTTCCCCGCTTCTTCTTCTTCGCCTATCGGCTCACCGTGAATCCTGTCC
TCTGCCTTGGAGCCCATAGCATCGAACAGCTTTAGGATAGCTTCAGGGCCTTAGAGTCCTAATCATCAGATATGATCACACATCTTGTCATAAAGATCCT
AAGAAAGGAACAACAATCACCACTGAGTAAGGAATAAAAAGGAAGACAGCGTAGCTGCGAAGACGAATTAATCAGATAATGGTCAATTTACAATAGTTTG
ATCTCGGGATGGATTTACAGCTTCCACAAGATGTCTTGTATTCGAACTATCTCTCTGTCCAGGGAATTACATTTTCTCAAAAGAGATGAAAGGTGGCATA
ACCTGTCCTATACAATCAATTGTGAGCAGGGATTTAAGCGATTCTGGAGGAGTAGAAATTATCGTCTTACCTGAGAGTTCGCCATAGCGAAGCCCTGAAC
TCGCTCAAAGGAGAAAAGCCAAGGGTCTGAAAGACCAGTCTCGTCAAGTTCCACCACAACATGATGACAACGCTACCCATCTCAACGGCAATTTCTCATT
ATTCATGCGGCGAACAAGCAAAAAAAACGCTGTAAAGCTTTGCGCCGTAAGGCGAAGATGCGAACGAAGCGAAGGGTCCGAAGGACTAGGCGAACTGTAC
GTTAGGAGCTGAGACGTAAGGAGAAGATGCGTAGCAACGAAGAGTACGAATAGGACGAATGTAGGTTCAGGGTAACCTTCGTATAGCAGGCTCACAGGAC
GAAGTCGCTGACTTTATAGCCTGGATAATCGTCTAGAAACTTAAGATTTTGTTGGGGTCATTACTGAGCAGAAGCCTGTAGCAGGAGTTGCTATAGATGA
TAGTTGAGATTCCTCACTATCCCTGTTGCAACTCCTGCGGATCCTCCATGCAATTCGACTTGCTTCACCTCAATCATCCACCATATCGGAAAATCCTCTC
AATGACCGATGTGTAAGCAGCGAAATGCCGATTGCCGACGATCCTTGGGTGATTGTAGGGTCTAACGAGCTGAGCCGCTACGCGGCGAAGAAGATGAAGG
ACGAATGATGTTTTTTTAGTTCCATTTATTTATCCATTTAGAACAACTTCGGAGGTGAGCCGATTTCACCCAACAAAGAGTTCAGGGTTGGGATACTTCT
GGGTCAAAGTCCCCCTCCCAGTGCACATGTTGGGTTTGGTTCTCTTGATCATCTTCGACCACAGCGAAGTACTAGTTTCAAGTGCTAGCTCTATTTCATT
TCTTGGGATTTTTTCAAGAACCGAATAGATCCCCCCTATCTTTTATTAACCTTCGGCCACGCTGGTTCGCTTACTTTATAACACCTACTTCGCCGCGTAG
CGGCTCAGCGCCTTATGGCCCCCTTATTGCCTAGTGAAATACACCCAGCTACTACGTAACCAAGGATAAATTCTTCGAACAAAGGAAAAGAATGATGCAT
GCGTGCTTGCAACGCTTTTCTTCACATCTCGCAGCCACCTTTTTATATATAAATATAAAATATATATTACCTTAACCGGTTTTTATGCAAAAAAAAACAA
AACGGGATTGGATTTCCACTCATAAGGAAGGAAGGTTAGATACCTTTGACAGGGTTGTATTTTTGGTTGAAATGGGATGGTGTTCAAACTCCCGAAATGC
AGTCTAGACAGTGGGCCCCCCCGTTTCTGACTAGACTGACTCGGGGAAGGGTCAATCTCCTCCGGAGCATGCTGCACAACCACTCATTTGTCCTGACTAA
ATAGTAGAATCTATCTCTCAGCGACAAAAAAGATCCGCCAAAAACCCCTTCCCAACCAGCACCAGCCCGCCCGATTTATTTTGTAAGATCAGCTAATTTA
AAGGGGTTAATCTGGTCCGAAGTTGTCGGAACGAATCGTTTGCTTTATCAAACAAAGCTTTATTAGGGGGTCTTGGTTGGCCCCCCTATTTTCAACCATT
ATAGCTGGCGTCGACCCGCTTTGTGATACGGGCGAACACGAAGAAGAACGCAGGCAGCGAAAATGCCAAAAGAGAAGAGCAAAGATTCCCGACCCAGAGC
ATGTTATTGACTCAACCACAAAGCTGTTGAATGAAGGTAGCTTGCTTACTCTCAGCCACTAGTTAGAAGAAAATCCCTTGACTTCGCGCTGCCGCCCTTA
TGCAGTAAAGAAAGCAAGTGAGGCGGGCTAAGATTCCATTCGAAGTAACAGGATTCGATGTTGCACCATTTTCAACTCTTATCGGGATCCGGAGTTTTTT
GAGAAAAGGTCCCATCCAAATAGATCATGATTGGGTCGACCATGCAGAAATGGGTCAGCCCCACTATCTTTCGTAAAGCCACCCATAAGCAGACTTGGAC
AGTTAGTAGGATAATATGAGGATCCGTAGAAGGAGGACCTATCTACAAAGATACGAAAGATAAACGACCTATTAAAGTTTCTTCAGAAAAGGCCAAGGAG
ATGCTATCAATTTCTTTCCCTCGTGGTCTCCCCAGAGCTAGGGGACATATATTGCTCGGATTAATCGTTCACAATTAAGACCAGGTGCTCATACCCAACA
ACGAAAAGAAAGTCAAACTTCGAAACTAAGACAAAACGCTTTTAAGCATCATTCAGATCGAGAAACTCCAATCGAATAACCTAAGGGAACAGGATTTCGC
CCTAAAGGGGGCTGATTGTTGTTTCGGGGCACTAAAAGTAGTTCTTAGGCTAGGGCGCTGCGATTTTACACTCTTCGGTAAACCCGGAGTAAAGAGACAA
AGAACTTATATCGCAAAAAGACCACTTCGAGCAGATGTCACGCGCTCAGGACACTACACCTATCTATGTCAATAGAGACAGACCATAGAGTAGTGCGACA
AAGAGGCAGGCACGCCTGAACATTCTTTCAAGTCGGAGGTTGATCCAACAGATGTGACTGCGGATTGCTCTTTTGGAAGGGCAGGGTCAGATCTGGAAAG
GAAGGAAGCCCGATTTCACGGTAAATAGCATCGGAGATCGTCTCCTACCGGACTGTCTTTTTCGGGCTTTCGCGGAGCCCCCCGCTAACGCAGCATCAGT
GGTGCTACGAGTCGGCCTCAGGAGACATCTTTTTTACTTTTGCTCGCTAGCCTTCCGCGCCATCGGCTTATCCGGTCCCGCACGGGTGCTTCTGGCACCT
TCTCGCGTATATGAAAGTCGACCCTCGAAAAGATGAAAGCATTCGATCT