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Detailed information on CNT30619402


BLAST search results

BLAST vs Swiss-Prot:
sp|Q332S2|NU1C_LACSA, E-value = 1e-140

BLAST vs NONCODE:
NONMEST004538, E-value = 2e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671235Sesamum indicumSetaria viridis4.5929.2791.15113forward
CNT30518502Sesamum indicumJuglans regia10.1165.0194.38249forward
CNT3020678Sesamum indicumCitrullus lanatus4.5529.0291.96112forward
CNT30589541Sesamum indicumMusa acuminata28.4787.5283.02701forward
CNT30236182Sesamum indicumBrassica oleracea9.7143.3890.79239forward
CNT30659065Sesamum indicumTriticum dicoccoides7.4732.885.87184forward
CNT30264063Sesamum indicumBrassica rapa4.3928.5794.44108forward
CNT30624957Sesamum indicumDaucus carota30.8747.888.95760forward
CNT30327547Sesamum indicumAsparagus officinalis21.5316.8282.83530forward

Expression of CNT30619402

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MEEKNLLINEFQFVDYYLSNLALESDFLL*

>peptide 2 (33 aa)
MIPYQDVSRIVVISEIKRLVQTIEVTPSPTVQR*

>peptide 3 (38 aa)
MKMKPRFSPTDRSFVLTTQKPHSFRSKSYFSFEFVHVF*

>peptide 4 (38 aa)
MGVVWIDVDTVSGLLLFSKAEVETIYFEIIIRIEIDFQ*

Sequence

>CNT30619402
CTTGATTCATATTCATTTCAATCTGAACAATAATTAAATCGATTCGATTCTAACAAGTATAGAACAAAATAAGGGAATAGATCGATAGAAAACTAAAGTT
TTTTCTATTCTATTTTCGGAATTCAAATTAAATAAAGGATTATAACATTCTTTTTCTATTGATTCTATTTGCCTTACTCATTTTAAAGATTTATTATTTA
TTGACGAGCTATAGCAATTGCACCTATTAAAGCGACTAAAAGAATTATTGAGTTCAAATGAAATGGAAGAAAAAAATCTGTTGATAAATGAATTCCAATT
TGTTGACTATTACTTATCAAATCTTGCTCTAGAATCTGATTTTCTTTTGTAGTCCAAATGATCCCATACCAGGACGTATCTAGAATAGTAGTAATTAGTG
AAATAAAAAGACTTGTACAAACGATTGAAGTAACTCCATCCCCAACGGTCCAAAGATGAAAATCTTTGTAATATTCTGAACCATTCATGAACATCATAGC
AAAAATGATTAAAACATTTATTGCTCCTACATAAATAAGAAGCTGCGCAGCAGCTACAAAATACGAGTTCGATAAGATATAGAATAAGGATACACAAAAA
AGAACCAATCCCAATGAAAAGGCCGAATAAATTGGATTCGGAAGTAATACTACTGCCAGACTTCCTAATATAAGACCCGATCCCAAAAAGACTAAAAGAA
AATCATGTATTGCTCCAGGTAAATCCATGTGATTTTATAGAAAAAATAAATCGAAATATTTCATGCCTTTATTGACCTGACCAGGAAAGAAGTTATCCTG
AAAAATAGGATAATTCTTAATTGAATGAAATTTGAATGGGGGTGGTGTGGATTGATGTAGATACAGTTAGTGGGCTACTCTTATTCTCGAAAGCAGAGGT
TGAAACTATATATTTTGAAATCATTATTCGAATAGAAATCGATTTTCAATGAAAATGAAGCCACGATTCTCGCCAACCGACCGTTCGTTTGTATTGACCA
CGCAAAAACCTCATTCCTTTAGATCCAAAAGCTATTTTTCTTTTGAATTTGTACATGTTTTTTGAATCAAGGTTTTTATACATTTTTTATTTGAGGTGAA
TTCGAAGAAATTGTTCGAATTGTGTAATCGTCAATTATTGACACCGGTAACCGACCTAAAGCAATTTGATTATAATTCAATTCGTGACGATCATAAGTAG
AAAGTTCATATTCTTCAGTCATTGATAACCAATTTGTTGGACAATACTCAACGCAATTACCACAAAATATACAGATTCAAAAATCAATACTGTAATTAAG
TAATCGTTTCTTTCGAATATTAGTCTCCAATTTCCAATCAACAACGGGTAGATCTATAGGACATACACGAACACATACTTCACAAGCAATGCATTTATCA
AATTCAAAATGGATTCGGCCTTGGAAACGTTCCGATGTGATCAATTTTTCGTAGGGGTATTGAATAGTTACAGGTAAACGATTCGCGTGGGACAAGGTAA
TCATGAAACCTTGACCAATGTACCTGGCAGCTCGTATTGTTTGTTGACCAGAATTCAAGAACTGAGTTAGCATAGGGAACATATCTGAATAGCTATAAAT
AATTTGACTTGTTTCTTTCTCTTGTTTGAGACAAGTTGTGAAGATAGAATATTCTATTGTTTTACAGTGAAAGAAGTTGGAACGAAGTTGTTAATAATAG
ATTACCTAGAGAAATAGGTAAAAGAAATTTCCATCCAAGATTTAATAGTTGGTCCATTCTCAGTCTCGGTAAAGTCCATCTTGTTGCAATAGAAATGAAC
AAGAACAAATAAGTTTTAGCTAATGTAATAAAGATACTGATTATTGTTCCAAAAACTTGACTTCTTTTATTTATGTCAAAAAGCTCAGGAACGAATATAT
ATGGAATAGAAAGATTCCAACCCCCCAAGTAAAGAACTGTTACAAATAATGAAGAAACTAGTAGATTTAGATACGAAGCAACGTAAAATAAACCAAATTT
GATACCGGAATATTCGGTTTGATAACCTGCTACTAATTCTTCTTCTGCTTCTGGTAAATCAAAGGGTAATCTCTCACACTCGGCTAGAGAAGAAATTAGA
AAAACGATAAACCCTATAGGTTGACGCCACAAATTCCATCCCCAAAAACCATATTTTGACTGCGCTTCAACTATATCAACTGTACTTGAACTGTTAGATA
GTAGAGATATTGATAATACACATAGAGTTAATGGTATTTCATAACTAATTGATTGAGCAGCAGCCCTTAATCCACCTAAAAAGGAATATTTATTATTTGA
TCCATATCCTGACATAAGAAGTCCAACGGGAGCAAGACTTGAAACGGCGATCCATAAAAAAACACCGATACTAAGATCGGCTAGAATAAAGCGATAACTA
AAAGAAAGAAAATGAATGAATGAAGAAGGAAGCTTCAGAGCTGGAAAGACTACAGAGGCTTT