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Detailed information on CNT30619379

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30678839	Sesamum indicum	Setaria viridis	99.36	56.57	95.23	775	forward
CNT30519050	Sesamum indicum	Juglans regia	100	69.33	96.54	780	forward
CNT30200729	Sesamum indicum	Pisum sativum	100	32.07	96.15	780	forward
CNT3048154	Sesamum indicum	Prunus dulcis	100	74.36	95.9	780	forward
CNT30224448	Sesamum indicum	Hordeum vulgare	86.79	85.59	93.06	677	forward
CNT30544401	Sesamum indicum	Brassica napus	100	60.99	95.64	780	forward
CNT30239033	Sesamum indicum	Brassica oleracea	100	57.44	95.51	780	forward
CNT30444212	Sesamum indicum	Aegilops tauschii	99.36	59.57	95.1	775	forward
CNT30261854	Sesamum indicum	Brassica rapa	100	73.17	95.64	780	forward
CNT3010382	Sesamum indicum	Zea mays	99.49	83.08	91.88	776	reverse complement
CNT30206557	Sesamum indicum	Helianthus annuus	100.13	36.21	97.31	781	forward
CNT30365254	Sesamum indicum	Sorghum bicolor	99.36	85.64	94.32	775	forward
CNT3036408	Sesamum indicum	Cucumis melo	100	73.79	97.44	780	forward

Expression of CNT30619379

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMRRRHEGRAIRQVIVNHRSNGRSPCRPFI*

>peptide 2 (44 aa)
MHPFQKSGFVARINFRITTVIRVAGTIKQTITDLMSHSQFHSLN*

>peptide 3 (42 aa)
FQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSAA*

Sequence

>CNT30619379
TTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACC
TGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCCGCGGAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTC
TCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACTACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAAT
CCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC
TCTCCGGAATCGAACCCTCATTCTCCGTCACCCGTCACCACCATAGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGT
CGCCGGCACGAGGGCCGTGCGATCCGTCAAGTTATCGTGAATCATCGCAGCAACGGGCGGAGCCCGTGTCGACCTTTTATCTAATAAATGCATCCCTTTC
AGAAGTCGGGGTTTGTTGCACGTATTAACTTTAGAATTACTACGGTTATCCGAGTAGCAGGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTC
GCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGA