Detailed information on CNT30619375


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730412Sesamum indicumCorchorus capsularis66.1698.996.571079forward
CNT30585697Sesamum indicumMusa acuminata60.0296.1796.83979forward

Expression of CNT30619375

Peptides detected in this lncRNA

>peptide 1 (42 aa)
FQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSAA*

>peptide 2 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQRNRTEIL*

>peptide 3 (36 aa)
MECLRNRYAAQKTDRGQGRSALGPTTKAACGGCCRCP

>peptide 4 (29 aa)
MQHRKLTAAKAGARLGRRLKRLAGDVVAAR

>peptide 5 (32 aa)
MKYECPRLSLLIITPIPKANVIGPKSYNVIPC*

>peptide 6 (82 aa)
MTTGRINQVAFLTDPAARMGRAQNGGGRRSHEAPNACFRGKQRPRPSYPTVCSASERSGDDAMGQRPEYVRPCAGRGTQRAP*

>peptide 7 (31 aa)
MMRRRHEGRAIRTIKQTITDLMSHSQFHSLN*

Sequence

>CNT30619375
GTTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC
CTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCCGCGGAGGGATACCTCCGCATAGCTAGTTAGCAGGCTCCACT
CCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAG
TCCTAAAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATT
AATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCC
TGTTAATCATTACTCCGATCCCGAAGGCCAACGTAATAGGACCGAAATCCTATAATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGC
ACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAGTTAAGACCAGGAGCGCATCGCCGGCAGAAGGGACGAGACGACCGGTGCACACC
AGAGGCGGACCGGCCGGCCCAACCCAAGGTCCAACTACGAGCTTTTTACCTGCAACAACTTAAATATACGCTATTGGAGTTGGAATTACCGCGGCTGCTG
GCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGTAGAGCCCGGTATTGTTATTTATTGTCAC
TACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTCATTC
TCCGTCACCCGTCACCACCATAGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAGGGCCGTGCGAT
CCGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGAC
AAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTCACCGACCCCGCCGCCCGCATGGGACGAGCCCAAAACGGTGGCGGGCGTCGTTCGCACG
AAGCGCCGAACGCTTGCTTTCGGGGTAAACAGAGGCCGAGGCCCTCGTACCCCACCGTGTGTTCCGCATCCGAGAGATCGGGCGACGACGCAATGGGCCA
ACGACCCGAGTACGTGCGGCCGTGCGCGGGACGTGGGACACAGCGGGCGCCTTGAGGTCCACCCCGCGCCGCGGCCCCGAGGGGTGCAGCGCAGGGCGAA
AACGGGACGTTCGGGACAATGGAATGCCTTCGCAATAGGTATGCAGCACAGAAAACTGACCGCGGCCAAGGCAGGAGCGCGCTTGGGCCGACGACTAAAG
CGGCTTGCGGGGGATGTTGTCGCTGCCCGAG