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Detailed information on CNT30619309


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641658Sesamum indicumNymphaea colorata80.7561.7992.451774forward
CNT30531232Sesamum indicumEucalyptus grandis80.7552.3894.761774reverse complement
CNT30318007Sesamum indicumCorylus avellana80.6650.795.321772forward
CNT30550163Sesamum indicumIpomoea triloba64.0969.6796.161408reverse complement
CNT30519036Sesamum indicumJuglans regia80.6657.3195.371772reverse complement
CNT30374088Sesamum indicumArabidopsis thaliana49.1163.4395.271079reverse complement
CNT30283174Sesamum indicumChenopodium quinoa80.6668.7494.361772reverse complement
CNT3021656Sesamum indicumCitrullus lanatus80.6629.2795.771772reverse complement
CNT30730504Sesamum indicumCorchorus capsularis53.98100.0895.031186reverse complement
CNT30526827Sesamum indicumPhaseolus vulgaris56.0896.9394.721232forward
CNT30632327Sesamum indicumVigna unguiculata80.7955.3394.821775reverse complement
CNT30195048Sesamum indicumPisum sativum80.7947.1994.481775reverse complement
CNT30508033Sesamum indicumNicotiana attenuata80.6653.2193.961772reverse complement
CNT30711135Sesamum indicumGlycine max80.7955.8795.11775reverse complement
CNT3047214Sesamum indicumPrunus dulcis80.8856.4892.41777reverse complement
CNT30383013Sesamum indicumTriticum turgidum80.4766.6291.181768reverse complement
CNT30588049Sesamum indicumMusa acuminata7071.9493.041538reverse complement
CNT30544747Sesamum indicumBrassica napus73.3362.9193.31611forward
CNT30311451Sesamum indicumCamelina sativa60.7684.4491.691335reverse complement
CNT3060563Sesamum indicumArabidopsis lyrata69.2369.4294.411521forward
CNT3083383Sesamum indicumBrassica juncea80.780.4493.231773forward
CNT30265711Sesamum indicumBrassica rapa80.769.293.181773reverse complement
CNT30445720Sesamum indicumSaccharum spontaneum67.3269.5393.041479forward
CNT30355977Sesamum indicumLactuca sativa58.5373.4491.991286reverse complement
CNT30433917Sesamum indicumPapaver somniferum80.8865.1993.751777reverse complement
CNT3023562Sesamum indicumPopulus trichocarpa69.1968.195.261520forward
CNT3037170Sesamum indicumCucumis melo80.6637.5195.321772reverse complement
CNT30583181Sesamum indicumEchinochloa crusgalli80.8475.7792.451776reverse complement
CNT30335982Sesamum indicumCynara cardunculus79.7553.3889.041752forward

Expression of CNT30619309

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MAHLELSIPWRGSTEQPRRPTYLKFENRSRALRPRCL*

>peptide 2 (35 aa)
MRCLSGFPQPLESTNPCARAVHMEPFPSSAFKVLI*

>peptide 3 (38 aa)
MCRPSQTPHLTMSSARIGAPERALGPKRGAVPRLRFTE*

>peptide 4 (53 aa)
MSTTGRGRHSVLRIFKGRRGRTGHHATCGALPAAGPYLRLSRFQGGQAVKQKR*

Sequence

>CNT30619309
CCTAGCCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCC
GGATCGGCGCGCCGGAGCGCGCCTTGGGTCCAAAAAGAGGGGCGGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTT
CACTTTCGCCTTTCGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT
TCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGGATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA
GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA
CATTGCGTGAGCATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGGCTGTTCGACGCC
CGGGGAAGGCCCCCGAGGGAGCCGTTCCCAGTCCGTCCCCTGGCCAGCACGCGACGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTTCGCCGACAGC
CGACGGGTTCAGAATTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACTGATCCATTTTGCCGACTTCCCTTGCCTACATTATT
CCATCGACCAGAGGTTGTTCACCTTGGAGACCTAATGCGGTTATGAGTACGACCGGGCGCGGACGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGG
GGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAG
ATAACTCTTCCCGAGGCCCCCACCGACGTCTCCGGACTCCCTAACGTTGCCGTCAGCCGCCGCGTCCCGGTTCAGGAATTTTAACACGATTCCCTTTTGG
AGCACACGCTGAATGCGCTGTCTGTCAGGCTTCCCCCAACCCTTAGAATCGACTAACCCATGTGCAAGAGCCGTTCACATGGAACCTTTCCCCTCTTCGG
CTTTTAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCCGCACCGACGGTCGCTCCGCCTGGGCTCGCGCCCAGGGTTTTGCGGCGACCGCCGC
ACCCTCCTACTCATCGGGGCCTGGCCCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTG
AGTTGTTACACACTCCTTAGCGGATTTCGACTTCCCTGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGTGATCTAGGTTAGCGCGCAGTT
GGGCACCGTAACGCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCCTGGCGCGGCTCAACGGA
GCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCGCT
CGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCGGCTCTCGCCGTTCCACATCCG
ACCGGGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCGCTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTAC
TTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCAC
GTGGTGCGGCAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGGGACCTGGGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGA
CTACAATTCGGACAGCGAAGCCGCCTGATTCTCAAGTTGGGTTGTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCC