Detailed information on CNT30619307


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT000710, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532002Sesamum indicumEucalyptus grandis89.6141.0693.271501forward
CNT30550233Sesamum indicumIpomoea triloba88.6652.6894.881485forward
CNT30730400Sesamum indicumCorchorus capsularis77.6798.1193.541301reverse complement
CNT30507933Sesamum indicumNicotiana attenuata89.4973.7395.461499forward
CNT30711221Sesamum indicumGlycine max75.6492.7595.031267forward
CNT30163337Sesamum indicumPistacia vera71.2886.2793.631194forward
CNT30639077Sesamum indicumCapsicum annuum60.6660.896.951016forward
CNT30383474Sesamum indicumTriticum turgidum88.4887.8590.621482forward
CNT30540266Sesamum indicumBrassica napus86.5775.2992.761450forward
CNT30311297Sesamum indicumCamelina sativa8873.1992.131474forward
CNT30217525Sesamum indicumKalanchoe fedtschenkoi89.6183.6789.341501forward
CNT30653443Sesamum indicumRosa chinensis77.7999.0192.791303forward
CNT30719706Sesamum indicumMalus domestica golden65.3194.3995.71094forward
CNT30355986Sesamum indicumLactuca sativa88.6654.490.31485forward
CNT30434045Sesamum indicumPapaver somniferum89.8551.2392.361505forward
CNT30574469Sesamum indicumVitis vinifera86.3978.9495.161447forward
CNT30176196Sesamum indicumVigna angularis73.1981.5794.051226reverse complement
CNT30558388Sesamum indicumPanicum hallii74.0389.2792.821240forward

Expression of CNT30619307

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 2 (35 aa)
MRGTTPLFGPKARSGAPIRAEDIVRWGVWLGRHIC*

>peptide 3 (34 aa)
MNGLMRFPLSLSTIQRNHSQGNGLGGISGERRPC*

Sequence

>CNT30619307
AAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAAGCCC
GACAGACAGCGCGTTCAGCGCGTGCTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGCGGCGGCTGACGGCAACGCAAGGGAAGTCGGCAAAA
TGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTTCCGAACCCGTCGGCTGGCGGCGAACTGCTCGAGCTGCTCCC
GCGGCGAGAGCGGGTCGTCGCGTGCCGGCCGAGGGACGGACTGGGAACGGCTCCCTCGGGGGCCTTCCTCGGGGGTCGAACAGCCGACTCAGAACTGGTA
CGGACAAGGGGAATCCGACTGTTTAATCAAAACAAAGCATTGCGATGGTCCTTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAA
AGGGAAGGGGTAAACGGCGGGAGGCACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTCATTAGTGACGCGCATGAATGGATTAATGAGATTCC
CACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGA
CTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGG
ATGCGGGGCACTACCCCTCTTTTTGGACCCAAGGCGCGCTCCGGCGCGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACA
TCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAG
TACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTG
TGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACC
CACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGA
GGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGA
ATCCGGGCTAGAAGCGACGCGTACGCCCGCCGTCCGCTTGCCGACCCGCAGTAGGGGCCCCAGGGCCCCCAAGGGCACGTGTCGTTGGCCAAGCCATCGC
GGCGGACGAGCCGCGCTGGCCGCCTTGAAGTACAATTCCCATCGAGCGGCGGGGAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGC
GGCAGAGTGGCCTTGCTACCACGATCCGCTGAGATTCAGCCCTTTGTCGTTTCGATTCGTCCCTCCCCCCCCTCC