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Detailed information on CNT30619260


BLAST search results

BLAST vs Swiss-Prot:
sp|O23255|SAHH1_ARATH, E-value = 2e-170

BLAST vs NONCODE:
NONBRAT004190, E-value = 1e-110

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675638Sesamum indicumSetaria viridis33.5272.2786.83357forward
CNT30639580Sesamum indicumNymphaea colorata15.9637.4486.47170forward
CNT30529934Sesamum indicumEucalyptus grandis13.4334.2987.41143forward
CNT30517189Sesamum indicumJuglans regia9.7726.7486.54104forward
CNT30702258Sesamum indicumQuercus lobata27.2361.785.17290forward
CNT30376640Sesamum indicumArabidopsis thaliana38.0350.3184.69405forward
CNT3020603Sesamum indicumCitrullus lanatus58.440.1881.99622forward
CNT3072357Sesamum indicumQuercus suber59.5361.7385.17634forward
CNT30380227Sesamum indicumManihot esculenta14.8437.8989.24158forward
CNT30402445Sesamum indicumBeta vulgaris25.3560.8184.07270forward
CNT30200315Sesamum indicumPisum sativum32.7767.6486.25349forward
CNT30505192Sesamum indicumNicotiana attenuata15.4929.287.27165forward
CNT30709695Sesamum indicumGlycine max19.5362.2887.02208forward
CNT30543653Sesamum indicumBrassica napus30.0546.3883.12320forward
CNT3076654Sesamum indicumBrassica juncea27.763.1787.8295forward
CNT30261371Sesamum indicumBrassica rapa29.1174.1683.23310forward
CNT30612558Sesamum indicumArabis alpina35.1299.281.82374forward
CNT30601056Sesamum indicumFraxinus excelsior23.1945.6684.62247forward
CNT30139718Sesamum indicumLolium perenne7.9822.4985.8885forward
CNT30607325Sesamum indicumGossypium raimondii48.8340.3184.04520forward
CNT30231757Sesamum indicumAnanas comosus12.1149.0582.17129forward
CNT30651401Sesamum indicumRosa chinensis14.6558.2187.18156forward
CNT30680065Sesamum indicumTriticum urartu14.2740.1184.21152forward
CNT30720770Sesamum indicumTriticum spelta15.427.3382.93164forward
CNT30365203Sesamum indicumSorghum bicolor15.2175.3583.33162forward
CNT30355186Sesamum indicumLactuca sativa28.3641.0383.77302forward
CNT30573685Sesamum indicumVitis vinifera11.4631.2884.43122forward
CNT30705212Sesamum indicumPrunus avium13.2438.3288.65141forward
CNT3021984Sesamum indicumPopulus trichocarpa35.5917.7285.49379forward
CNT30329805Sesamum indicumDioscorea rotundata27.2349.483.79290forward
CNT30151326Sesamum indicumBrachypodium distachyon12.7733.586.03136forward
CNT30103876Sesamum indicumOryza rufipogon33.2478.1584.75354forward
CNT30117878Sesamum indicumOryza nivara33.0578.2283.81352forward
CNT30723196Sesamum indicumLupinus angustifolius49.7766.584.15530forward

Expression of CNT30619260

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MTKLGWPVAQPKFIKRPSAKTMMPVFVSGNTHLSV*

>peptide 2 (35 aa)
VEVIILQQFGVVKNTMKPKAIHLRSKYTFFIYSQI*

>peptide 3 (39 aa)
MMALFFIFLMWPTMIMSLLPVVVTKISASETTSSRVRTW*

>peptide 4 (40 aa)
CGSDHIATVWSCKEYNEAESNTFAQQVHFLHILSNMTTEK*

Sequence

>CNT30619260
ATGTGGAAGTGATCATATTGCAACAGTTTGGAGTTGTAAAGAATACAATGAAGCCGAAAGCAATACATTTGCGCAGCAAGTACACTTTCTTCATATACTC
TCAAATATGACAACAGAGAAATAAAAATGAAATTCACTGTGATGACTACTCAAATCCCCTCTTCAACTTATTCTTGGTCATCATCCAATGAACTCCCAAA
TTGCTGAACCCCCTCAACAACACTTTAGGTGATTCAAAAGAAACATTTGTGCTGTTAAATTGTTTTCTTTTCCCAGTTTTATGTTGCTTTCCCCTTAGTA
CCTGTAGTGAGGAGGCTTGTAAGGACCCTCAATTGGGACGCTAATGTAGTCGGCCTGGTCCTTGGAGAGCTTGGTGAGCCTTGCACCAAGTTTGCCCAGG
TGGAGGGCTGCAACCTTCTCATCAAGGTGCTTGGGCAACACATAGACCTTCTTCTCATATTTGCCCGACTTCCTCTCGTTCCAGAGCTCAAGTTGGGCAA
TAACTTGGTTGGTGAACGAGCACGACATGACGAAACTAGGGTGGCCGGTGGCACAGCCCAAGTTCATCAAACGACCCTCGGCCAAGACAATGATGCCTGT
TTTTGTGTCTGGGAACACCCATCTGTCGGTTTGAGGCTTGATGGTGATTCTCTTCACACCAGGGTAGGTCTCAAGACCCTGCATATCGATTTCATTGTCA
AAGTGACCAATATTGCAGATGATGGCGTTGTTCTTCATCTTCCTCATGTGGCCAACCATGATAATGTCCTTGTTACCAGTGGTGGTGACAAAGATATCAG
CTTCGGAGACGACATCCTCGAGGGTGAGGACTTGGTAGCCTTCCATGAGGGCTTGAAGGGCACAGATGGGATCGATCTCAGTCACAATCACACGGGCACC
GGCTTGTTTCAAGGCAGCAGCACAACCCTTCCCAACATCACCATAACCGCAAACAACACCGACCTTTCCAGCAATCATCACATCGGTGGCCCTCATCAGT
CCATCGGGCAGAGAGTGGCGGCACCCATACAAGTTATCAAACTGGTAAACCACAACATGACAAGG