Detailed information on CNT30619236


BLAST search results

BLAST vs Swiss-Prot:
sp|P93312|YMF16_ARATH, E-value = 6e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30592641Sesamum indicumMusa acuminata20.766.9487.79467forward

Expression of CNT30619236

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MKYGKCQTLGTTRGRVRNRNKEKREPLKWRNRLYFLLCSP*

>peptide 2 (49 aa)
TKKKTFPYEHSIHVSVCGRVKGSPLLRISPLILDRSSEGSPRFIAVLTH*

>peptide 3 (49 aa)
MSDAKPRTSLRSYWHSLPKKKEQTPLKTRVRYNKAISVHRPSHGAVRER*

>peptide 4 (86 aa)
MESAKHWELPGEELGTGTRRSENHLNGGIDCISSFVPHSNWGSKSTKFDDLLREKRSKSMLLKTLQHMSGRPPLIVYEQNTSQKAR*

Sequence

>CNT30619236
ACCAAAAAAAAAACTTTCCCGTATGAGCATTCGATACATGTATCAGTCTGTGGAAGAGTGAAAGGGTCACCACTACTAAGGATCTCCCCCTTAATCTTAG
ATAGGTCGTCTGAGGGTTCGCCGCGGTTCATTGCTGTGCTTACACACTAGGCTACCCTTTTCCGAAAGCTCCGCGGGACCACCTACCACTAGTCTTCGGC
CGGAGGGGTTTATTGCACAAAAACGCCGGGACGCAGGCTCCCGAAAAGGGAAGCCCAACGAATGTCAGATGCAAAGCCCCGCACCTCATTAAGATCATAT
TGGCATAGTCTCCCAAAAAAAAAAGAGCAGACTCCATTAAAGACGAGAGTGAGGTACAACAAGGCCATTTCTGTCCACCGCCCTTCTCACGGAGCCGTAC
GTGAACGTTAACGCTCATACAGCTCCCAGCCAGCAAGCAGTTAGCCTTCCTCTACAAGGAATGGAAGTGTGGATGAATCGCATATGTTAGTTGAGAATTG
CTCTGGAATTCATTGATAATCAATTTGCTTGGTTCTAGGGGGGCTACTCTTCTTTTTTGTCGATCGAGCCGCTCTCCCTCATTCCACTCGTCCAGCCCTC
TTCACGAACTTCTACAATCCATGCCACAAAGATAGCCAACTCTATTATCAAAGAATAAGGAAACGGGCGACAATTTGGCACCAGATATCTGGAGGTGTGG
AAAGAGCAGCTGTGAGAAGCGGAAAAACCATAAAAAAACGACGATTGTTTGTGGAAGTTTCTACAGAAAGACCCCTTGGTTCTATGAACGGATCACAATT
ACAGGTACCTGGGAGCATACCGATGGAATGAACGAAATACGAACAGTCATAATATGGTCATAGATCTTAGGTTGTAACTTGATCATAAGCGAATTTGTTG
ATGTTTCACCCATGAAGTATGGAAAGTGCCAAACATTGGGAACTACCCGGGGAAGAGTTAGGAACAGGAACAAGGAGAAGCGAGAACCACTTAAATGGAG
GAATCGATTGTATTTCCTCCTTTGTTCCCCATAGCAACTGGGGATCAAAAAGCACCAAATTTGATGACTTATTAAGGGAAAAACGAAGTAAGAGCATGCT
ATTGAAGACGTTGCAACATATGTCGGGAAGGCCTCCGTTGATTGTGTACGAACAAAATACGAGTCAAAAGGCAAGGTAAGAAAGGGTTTAGCTAATGGAG
ATATTAACTCTTCCGGGAACCAGTAACGCGTAAACCATGTCAAACCAAGACCAATCAATATCCGAACGGAACGGATTCGAGCTTCTCCTAGAATAGTTTC
CGGTGCAAAATGAAATTCATAGGATATATATGAGAAATTCAAAGCAAAAATAGAACTACGACCGACCATCATATTAGTAAATAAACGTATTCTGTTTCTC
TTGTCCCGACCTTGATCTTTTATGAGATAATACGTCTACGCGTAGTCTAGAGCTCGTTGGTACGACGGTTTACCTCTAAAAGCAAAGAGATGGCGAAAGG
GTGCTCTATCTAGAACCCTTAATTCCTCCTCTTATAGATGCTATAGGATGTTCTGTTATAGGAAGTAGGTCCTATAGCTCAAGCCGAAACCTTTTCCAAC
TCTAACTCCTCTATCGCTATCGGTCAAGTCGGGGCTTTACCACAGGTCTCTACTTCTATAGGAAAACGCATCTTGCCGAAATACTCCGACCCTTCAAATA
TAGATTCAGTTGTGCAACTGAACGATCCTAACCTAAATCTAGCTCGTAACGGGGCTACGTGACTGGAACAGCTATCCTTTCCTTCTGTCCTAGGCGGGGA
TAGGGAAGTCTAGAGAAAGAGGCCAGACGCGGGTCCCTTCCTCTCATAGGAGCAAAGAACACTAGAATATTTCTCAATGCGGATACAAGAAGGAACAAGT
GCGCAGGTCCTTTCCTTCAGTCTCATGTCAAGTCAACTTTAGATATGTTCTCGGGTCGGCTGTGAAAGAGAGGGTTTTTCTCTGTAGCTAAGGGCTTAGG
GGAGGGAAACTTCTCTTTCAGAACATAGACAGAAATCCAAAGATCCTTCTATGAAGGCAAAGCTCAGTTTATATTCTTATAGAGTCTCATCTCCCTACGC
CCATTCATCAAGAGAAGGTGTGTGAGTACTTCTGTTGCGTAGAAAAGGAGTCAAATATTGGTTGGTATTCGTCTCGGGGGTAGAGAAGCTTTGTACGAAT
TGGATGAAATTCCTCCCTATTCTTCCGACCTATGAACAATGTTCTAATTC