Detailed information on CNT30619235


BLAST search results

BLAST vs Swiss-Prot:
sp|P93312|YMF16_ARATH, E-value = 1e-109

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533443Sesamum indicumEucalyptus grandis6.5267.3696.89161forward
CNT30374334Sesamum indicumArabidopsis thaliana34.7212.5292.66858forward
CNT30635771Sesamum indicumCapsicum annuum6.3143.3395.51156forward
CNT30147428Sesamum indicumMedicago truncatula10.4833.6492.66259reverse complement
CNT3060477Sesamum indicumArabidopsis lyrata34.657.1590.53855forward
CNT30609506Sesamum indicumGossypium raimondii6.1931.4894.77153reverse complement
CNT30228064Sesamum indicumAnanas comosus4.784093.22118reverse complement
CNT30721405Sesamum indicumTriticum spelta8.8693.1991.32219forward

Expression of CNT30619235

Peptides detected in this lncRNA

>peptide 1 (53 aa)
RFEHTERTPSTMALLIVEDIKQRILSISLPRSVSTRALYRLWRIPWPVEGETN*

>peptide 2 (49 aa)
MSDAKPRTSLRSYWHSLPKKKEQTPLKTRVRYNKAISVHRPSHGAVRER*

>peptide 3 (54 aa)
MILTFTKKKTFPYEHSIHVSVCGRVKGSPLLRISPLILDRSSEGSPRFIAVLTH*

>peptide 4 (40 aa)
MKYGKCQTLGTTRGRVRNRNKEKREPLKWRNRLYFLLCSP*

>peptide 5 (86 aa)
MESAKHWELPGEELGTGTRRSENHLNGGIDCISSFVPHSNWGSKSTKFDDLLREKRSKSMLLKTLQHMSGRPPLIVYEQNTSQKAR*

Sequence

>CNT30619235
GAAGATTCGAGCACACCGAGAGGACACCTAGCACCATGGCTTTATTGATAGTTGAGGATATCAAGCAGCGGATCCTTAGTATCTCTCTACCTAGATCAGT
CAGTACAAGAGCTTTATATAGACTGTGGCGTATCCCTTGGCCTGTCGAGGGAGAAACCAACTGATAACCACACTGTTGTACTGTACTACTATTTCATTTT
ACTTAATGATACTTACATTTACCAAAAAAAAAACTTTCCCGTATGAGCATTCGATACATGTATCAGTCTGTGGAAGAGTGAAAGGGTCACCACTACTAAG
GATCTCCCCCTTAATCTTAGATAGGTCGTCTGAGGGTTCGCCGCGGTTCATTGCTGTGCTTACACACTAGGCTACCCTTTTCCGAAAGCTCCGCGGGACC
ACCTACCACTAGTCTTCGGCCGGAGGGGTTTATTGCACAAAAACGCCGGGACGCAGGCTCCCGAAAAGGGAAGCCCAACGAATGTCAGATGCAAAGCCCC
GCACCTCATTAAGATCATATTGGCATAGTCTCCCAAAAAAAAAAGAGCAGACTCCATTAAAGACGAGAGTGAGGTACAACAAGGCCATTTCTGTCCACCG
CCCTTCTCACGGAGCCGTACGTGAACGTTAACGCTCATACAGCTCCCAGCCAGCAAGCAGTTAGCCTTCCTCTACAAGGAATGGAAGTGTGGATGAATCG
CATATGTTAGTTGAGAATTGCTCTGGAATTCATTGATAATCAATTTGCTTGGTTCTAGGGGGGCTACTCTTCTTTTTTGTCGATCGAGCCGCTCTCCCTC
ATTCCACTCGTCCAGCCCTCTTCACGAACTTCTACAATCCATGCCACAAAGATAGCCAACTCTATTATCAAAGAATAAGGAAACGGGCGACAATTTGGCA
CCAGATATCTGGAGGTGTGGAAAGAGCAGCTGTGAGAAGCGGAAAAACCATAAAAAAACGACGATTGTTTGTGGAAGTTTCTACAGAAAGACCCCTTGGT
TCTAGTGAACGGATCACAATTACAGGTACCTGGGAGCATACCGATGGAATGAACGAAATACGAACAGTCATAATATGGTCATAGATCTTAGGTTGTAACT
TGATCATAAGCGAATTTGTTGATGTTTCACCCATGAAGTATGGAAAGTGCCAAACATTGGGAACTACCCGGGGAAGAGTTAGGAACAGGAACAAGGAGAA
GCGAGAACCACTTAAATGGAGGAATCGATTGTATTTCCTCCTTTGTTCCCCATAGCAACTGGGGATCAAAAAGCACCAAATTTGATGACTTATTAAGGGA
AAAACGAAGTAAGAGCATGCTATTGAAGACGTTGCAACATATGTCGGGAAGGCCTCCGTTGATTGTGTACGAACAAAATACGAGTCAAAAGGCAAGGTAA
GAAAGGGTTTAGCTAATGGAGATATTAACTCTTCCGGGAACCAGTAACGCGTAAACCATGTCAAACCAAGACCAATCAATATCCGAACGGAACGGATTCG
AGCTTCTCCTAGAATAGTTTCCGGTGCAAAATGAAATTCATAGGATATATATGAGAAATTCAAAGCAAAAATAGAACTACGACCGACCATCATATTAGTA
AATAAACGTATTCTGTTTCTCTTGTCCCGACCTTGATCTTTTATGAGATAATACGTCTACGCGTAGTCTAGAGCTCGTTGGTACGACGGTTTACCTCTAA
AAGCAAAGAGATGGCGAAAGGGTGCTCTATCTAGAACCCTTAATTCCTCCTCTTATAGATGCTATAGGATGTTCTGTTATAGGAAGTAGGTCCTATAGCT
CAAGCCGAAACCTTTTCCAACTCTAACTCCTCTATCGCTATCGGTCAAGTCGGGGCTTTACCACAGGTCTCTACTTCTATAGGAAAACGCATCTTGCCGA
AATACTCCGACCCTTCAAATATAGATTCAGTTGTGCAACTGAACGATCCTAACCTAAATCTAGCTCGTAACGGGGCTACGTGACTGGAACAGCTATCCTT
TCCTTCTGTCCTAGGCGGGGATAGGGAAGTCTAGAGAAAGAGGCCAGACGCGGGTCCCTTCCTCTCATAGGAGCAAAGAACACTAGAATATTTCTCAATG
CGGATACAAGAAGGAACAAGTGCGCAGGTCCTTTCCTTCAGTCTCATGTCAAGTCAACTTTAGATATGTTCTCGGGTCGGCTGTGAAAGAGAGGGTTTTT
CTCTGTAGCTAAGGGCTTAGGGGAGGGAAACTTCTCTTTCAGAACATAGACAGAAATCCAAAGATCCTTCTATGAAGGCAAAGCTCAGTTTATATTCTTA
TAGAGTCTCATCTCCCTACGCCCATTCATCAAGAGAAGGTGTGTGAGTACTTCTGTTGCGTAGAAAAGGAGTCAAATATTGGTTGGTATTCGTCTCGGGG
GTAGAGAAGCTTTGTACGAATTGGATGAAATTCCTCCCTATTCTTCCGACCTATGAACAATGTTCTAATTC