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Detailed information on CNT30619215


BLAST search results

BLAST vs Swiss-Prot:
sp|P26856|COX1_MARPO, E-value = 4e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30436229Sesamum indicumAegilops tauschii15.9426.6795.83168forward
CNT30205015Sesamum indicumHelianthus annuus16.8943.4194.38178forward

Expression of CNT30619215

Peptides detected in this lncRNA

>peptide 1 (88 aa)
MNIVGVPLSRQSQHIAQCVFRFESEKGHLKPKNQKRCWYNIGSPPPAGSKKVVLKFRSVNNMVIAPASTGSDNKSGNAVTRMDQTNRGD

>peptide 2 (29 aa)
MVPSASKNPANQFDGASSVIGRMTGISST*

Sequence

>CNT30619215
ATCATGGTGAATACTGTCAGGTTTAAATGCTTTGAGATCGTAAAGACTGTAATATTCCTCAATAAGGAAGAATCGTCGTGATTTATGACTTCGAAAAGTA
CTTGATTTAAAGTAATCTAGCATCATGATAACATCTTTTCGACTTTGTACAGACCATTGATAGTAACCATTTTGACTACTATCAAAGTAGATATTTCCTC
CAAATACTACCTTATAAGACTCTACATCTTGTAGAAGTTTATTAGTTACTCGAATACTTAGTTGAGGTAGTCGATTCTTCATAGCGATACCAATGGTACC
ATCAGCATCAAAGAATCCTGCAAACCAATTTGATGGAGCATCTAGTGTAATAGGTAGAATGACAGGGATATCCAGTACTTGACAGACACGATGTAGTTGA
AGGAGTCGTGCTGAATGTCGAATATGACCATTAATACAATTCATTAGTTTAATCATACCAAGTTGATTATGTAGTCGATAACGATAAGCTTTAGCACCTG
ATCGCATTTTAATACTTCCACCAAGCATATGTTGGATATATCGTAGTAGTGGTAGATCTTCAAGTCCCATAGTAATTTCAAGAGAAGCATATCCTTGTTT
ACTAACTTGAAGACTTCCATCACCATCGATAATTCCAGCTAGCCACTCACAGAAGGATTTAGGATAAGTTGTTGCGCATGTAGTCTCTGAGGTTCCTACT
AGACTGCTTTTATGTCGTTGGTTACCTGCTGATTGTGTCTTAGATACTCCATTTTGACTAGATCGGGGTTTGACTATAAAACCACTTATGAACATAGTAG
GAGTACCATTAAGCAGACAGTCCCAGCATATAGCGCAATGCGTATTCAGATTTGAATCTGAAAAGGGCCATTTAAAACCGAAGAACCAAAAGAGATGCTG
GTATAATATTGGGTCTCCCCCTCCAGCAGGATCAAAAAAGGTTGTATTAAAGTTTCGATCAGTTAATAACATGGTAATTGCCCCAGCCAGTACCGGAAGT
GATAATAAAAGTGGGAATGCTGTCACTAGAATGGACCAAACAAATAGGGGTGAT