CANTATAdb - search

Detailed information on CNT30619071

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30698389	Sesamum indicum	Quercus lobata	101.29	53.61	90.74	788	reverse complement
CNT30500372	Sesamum indicum	Coffea canephora	100.26	72.97	90.77	780	forward
CNT30730547	Sesamum indicum	Corchorus capsularis	100.77	68.53	90.69	784	forward
CNT30424816	Sesamum indicum	Papaver somniferum	101.03	59.23	90.59	786	forward

Expression of CNT30619071

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MGPGDAPRSDVERREPVRRSARGADQRGLRRRPKPGQSICPRNAVAPIVADSARPRRASATARSRRWPAGSPFDPS*

>peptide 2 (56 aa)
MPAERRRPDRGGQRAPTACLGNCALPALASGLPIRPVMKHGPRSLTCVRVNGRANP*

>peptide 3 (33 aa)
MCASQRASKPVRRKEADRRDPPRGLQRRPTLIF*

Sequence

>CNT30619071
TTACAAGGATTACCCTAGTAACGGCGAGCGAACCGGGAATAGCCCAACTTGAGAATCGGGCGGCTTCGCTGTTCGAATTGTAGTTTGGAGAAGCGTCCTC
AGCGGCGGACCAGGCCCAAGTCCCCTGGAAAGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGCCGCACCACGAGGCGCTGTCGGCGAG
TCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAATACCGCGAGGGAAAGAT
GAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGCCCGGTGATGCGCCCCGGTCGGATGTGGAACGGCGAG
AGCCGGTCCGCCGATCAGCTCGGGGCGCAGACCAGCGCGGATTGAGGCGGCGGCCAAAGCCCGGGCAGTCGATATGCCCGCGGAACGCCGTCGCCCCGAT
CGTGGCGGACAGCGCGCGCCCACGGCGTGCCTCGGCAACTGCGCGCTCCCGGCGCTGGCCAGCGGGCTCCCCATTCGACCCGTCATGAAACACGGACCAA
GGAGTCTGACATGTGTGCGAGTCAACGGGCGAGCAAACCCGTAAGGCGTAAGGAAGCTGACCGGCGCGATCCCCCCCGAGGGCTGCAACGCCGACCGACC
TTGATCTTCTGAGAAGAGTTCGAGTGAGCATACTTGTCGGGACCCGAAAGATGGTGAACTATGCTTGAGCGGGGCGAA