CANTATAdb - search

Detailed information on CNT30619046

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30519096	Sesamum indicum	Juglans regia	93.56	70.11	92.54	523	forward
CNT30434067	Sesamum indicum	Papaver somniferum	92.84	74.89	92.49	519	forward

Expression of CNT30619046

Peptides detected in this lncRNA

>peptide 1 (44 aa)
LAATSIRAGLRPELIGGPALAVPHPTGAHHRAPSASLPTISSTL*

>peptide 2 (68 aa)
FGRHLNPRWSAPRADRRTGSRRSTSDRGASPGPIRFPPDNFKHSLTLFSNPFHLSLAVLVRYRSLARI*

Sequence

>CNT30619046
TTTTGGCCGCCACCTCAATCCGCGCTGGTCTGCGCCCCGAGCTGATCGGCGGACCGGCTCTCGCCGTTCCACATCCGACCGGGGCGCATCACCGGGCCCC
ATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAATCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCC
GTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGCCGACAGCGCCTCGTGGTGCGGCAGGGTCCGGGCACG
ACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGGGACTTGGGCCTGGTCCGCCGCTGAGGACGCTTCTCCAAACTACAATTCGAACAGCGAAGCCGC
CCGATTCTCAAGTTGGGCTATTCCCGGTTCGCTCGCCGTTACTAGGGTAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACATAGCGG
GTGATCCCGCCTGACCTGGGGTCGCGGTCAGAGGCGCTGGCGCCTTTGGGTCCAACGTG