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Detailed information on CNT30619000


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 4e-36

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Sesamum indicumOryza sativa15.7410093.56481forward
CNT30524649Sesamum indicumSetaria italica32.630.2293.57996forward
CNT30550219Sesamum indicumIpomoea triloba64.2945.2396.641964forward
CNT30378673Sesamum indicumArabidopsis thaliana19.0846.7596.57583reverse complement
CNT30283003Sesamum indicumChenopodium quinoa16.9954.3594.99519reverse complement
CNT30730372Sesamum indicumCorchorus capsularis45.4371.7395.11388forward
CNT30632407Sesamum indicumVigna unguiculata44.6550.595.381364reverse complement
CNT30490123Sesamum indicumOlea europaea28.1249.3498.25859forward
CNT30505432Sesamum indicumNicotiana attenuata64.3282.46971965forward
CNT30712870Sesamum indicumGlycine max24.4845.0196.79748forward
CNT30157615Sesamum indicumPistacia vera15.1963.2295.04464forward
CNT30185187Sesamum indicumSecale cereale32.4127.9994.24990forward
CNT30300122Sesamum indicumTriticum aestivum32.4145.994.24990forward
CNT30221907Sesamum indicumHordeum vulgare30.778.194.03938forward
CNT30394721Sesamum indicumTriticum turgidum32.3426.9794.33988forward
CNT30569655Sesamum indicumActinidia chinensis33.0628.3693.961010forward
CNT30511493Sesamum indicumSolanum lycopersicum9.5932.7799.32293reverse complement
CNT30554477Sesamum indicumOryza glaberrima12.6753.5396.12387reverse complement
CNT30435868Sesamum indicumAegilops tauschii27.7960.994.82849forward
CNT30258698Sesamum indicumAvena sativa13.4250.7496.34410reverse complement
CNT30670388Sesamum indicumTriticum dicoccoides32.4135.3194.14990forward
CNT30140120Sesamum indicumLolium perenne32.4129.8194.44990forward
CNT3017954Sesamum indicumZea mays32.5726.2693.97995forward
CNT30605266Sesamum indicumGossypium raimondii26.1238.1397.74798forward
CNT30216578Sesamum indicumKalanchoe fedtschenkoi43.5739.9695.641331forward
CNT30655407Sesamum indicumRosa chinensis63.9958.4896.061955forward
CNT30207637Sesamum indicumHelianthus annuus45.4771.0195.91389forward
CNT30628241Sesamum indicumDaucus carota43.9349.796.941342reverse complement
CNT30689137Sesamum indicumTriticum urartu28.8773.3294.1882forward
CNT30721631Sesamum indicumTriticum spelta32.4128.5194.34990forward
CNT30346087Sesamum indicumEragrostis tef19.3557.1694.92591forward
CNT30359520Sesamum indicumLactuca sativa45.4354.5296.971388reverse complement
CNT30434643Sesamum indicumPapaver somniferum24.2699.694.6741forward
CNT30571858Sesamum indicumVitis vinifera43.3138.1796.751323reverse complement
CNT3057903Sesamum indicumAmborella trichopoda38.448.9691.391173reverse complement
CNT30108930Sesamum indicumOryza longistaminata28.4537.1495.17869forward
CNT3038420Sesamum indicumCucumis melo30.4465.1395.48930forward
CNT30499372Sesamum indicumDigitaria exilis32.5729.2793.67995forward
CNT30603680Sesamum indicumOryza punctata32.4125.0894.44990forward
CNT30113381Sesamum indicumFicus carica14.73100.994.22450reverse complement

Expression of CNT30619000

Peptides detected in this lncRNA

>peptide 1 (77 aa)
ELLVLEFSLSRLDWCSVYSTEACVAYAKQAGTRSKRMHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG*

>peptide 2 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 3 (30 aa)
MMSMARGRALNGLGWPHFALPTPRKLRIQA*

>peptide 4 (30 aa)
MTNPERPLFRLRMPNRRTDHSGGGGTLRGG*

>peptide 5 (59 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESVSSGTFCQSGKVFGD*

Sequence

>CNT30619000
GAGTTGCTTGTACTTGAATTTTCTTTGTCGAGATTGGATTGGTGTTCCGTGTACAGCACCGAAGCTTGTGTAGCCTATGCGAAGCAAGCGGGTACAAGAT
CGAAAAGAATGCATTGGATGGACGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTC
CGATCGGGAAACCGTATCCAAGCTTCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAGCTTAGCGAACTGAAACATCTGAGCAGCTAAAGGAAGGGAAAT
CAACCGAGACCCTGTTAGTAGCGGCGAGCGAGAGCGGATTGGGGCTTGAAAGCCCCTTTACTTTCTAGTAAAGGGCGCAGTGAACTGTAATTGTGAAAAG
ATTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTCTGATCGCTTT
TACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTATTTAGGG
AGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGACCGAAGCTTAGAGCCTTTACTTTCTATTAGATTATAAAGCGCACTCACTCTAA
CGGCGTACCTTTTGCATGATGGTTTAGCGAGGAAATGGGAACAGCGGCTTGAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAATCTTCTAGTTCTTCC
TATTTGAGCCAAAACCGATCGATCTACCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGAT
GACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAG
AGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAAGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTTGGGTGC
TAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGA
GGTGGGCGTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAA
GCGACGAGACCTTGAAAGTGTCAGTAGTGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACTAGACCTGGAGATATCAGAAGTGAGAATGCTGACAT
GAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGTTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCC
CGAAAGGGCTGTCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTATAGAACCATGCCTGTCTCTTGGAGCGAATTGGATGATCGGGCCGAAG
GCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTAATATGAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCGGTCGCCCTACGCGACTGGCC
CTTCAAAAGGCGAAACTCTCGTCGTAGTTTGGCGACCTATCTTCAGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGGGGTCGCGAGAGAGCAGAGCGTAC
CGCCCTGCCATAGTCACGAGTCTCTTTATATTCGCGACTCTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCC
TCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACCAGGGCGCTTGAGAGAACCACGTCGAAGGAACTCGGCAAAATGACC
CGGTAACTTCGGGAAAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTA
AGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTTAGTTGCTTTGAATGGAAACCCCGGTAAACGGCGGC
AGTAACTCTAACTGTCCTATAGTAGCGAAATCCTTGTCGCACAAGTAGCAACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCG
GTGAAATTGAATTCTCCGTGAACCTTAACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAATGACTAAT
CCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGAGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGAT
GCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGG
TCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGTTGATGA
CTCCCAAGAGCTCTTATCAACGGAGTTGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGATTGTTCGCCGAT
TTAAGTGGTACGTGAGTTGGGTTTAGAACGACGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAACCCTAGTAC
GAGAGGACTGGGTTGGGCCAACCTATGGTCTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTACTGCGCAGCGGGAA
ATCCTTCTCTATACAAGTTCTCGGACGAGGTTTTTGAATAGAACTTCGATAGGCG