Detailed information on CNT30618998


BLAST search results

BLAST vs Swiss-Prot:
sp|Q06735|ATPAM_BETVU, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200883Sesamum indicumPisum sativum73.8282.9890.71204forward
CNT3091389Sesamum indicumSolanum tuberosum6.9328.6893.81113forward
CNT30194088Sesamum indicumSecale cereale36.4860.6591.43595forward
CNT30226090Sesamum indicumHordeum vulgare26.3642.6688.37430forward
CNT30435797Sesamum indicumAegilops tauschii19.8794.4690.74324forward
CNT30212621Sesamum indicumHelianthus annuus70.7566.0993.071154forward
CNT30684056Sesamum indicumTriticum urartu7148.4790.671158forward
CNT30596036Sesamum indicumOryza meridionalis8.7753.1688.81143forward
CNT30481419Sesamum indicumChara braunii17.8433.8483.85291forward
CNT30571978Sesamum indicumVitis vinifera70.8225.0593.251155forward
CNT30103343Sesamum indicumOryza rufipogon20.5444.9187.76335forward

Expression of CNT30618998

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MAHPEYGVKNCRGVGSEAVAATRMEYSRAFASERI*

>peptide 2 (83 aa)
MMGATQRVQDWCWVENGSGGRGLRLNRLVDLRFPVIPQIVEFFTYSFEKIKWIKHILLRMYLFLAFFLYLSYLLRILVTLVLQ*

>peptide 3 (82 aa)
GEYIFTKTGKLFSFHGSSGYSSFILSIIEVFLSSFGAGACGIASGTPGCSSSSTVSNNCFQNSWAERDNDGGDSTGPGLVLG*

>peptide 4 (40 aa)
MDKAHSFKNVSISSFFSLFKLPFKDSSNSGFTVDRISFSY*

>peptide 5 (30 aa)
MTRISFSIGNGVYCGCLSISVSLAPLLSNA*

>peptide 6 (34 aa)
MPEWQHQGLSQIEQRRLLLDIVPILVLNSRILVS*

Sequence

>CNT30618998
TGGGGAATATATTTTCACGAAGACAGGTAAGCTCTTCAGCTTCCATGGATCATCCGGGTATAGCTCCTTCATCCTTAGTATAATAGAGGTTTTTCTTTCC
TCCTTCGGTGCTGGCGCCTGCGGCATCGCCTCCGGAACTCCCGGCTGTTCTTCTTCTTCAACAGTATCAAATAATTGTTTTCAAAATTCTTGGGCAGAAA
GAGATAATGATGGGGGCGACTCAACGGGTCCAGGACTGGTGCTGGGTTGAAAATGGATCAGGGGGCAGGGGGTTGCGGTTGAACCGGTTGGTTGACCTCA
GGTTCCCCGTCATACCCCAAATCGTGGAATTCTTTACTTACTCCTTCGAAAAGATCAAATGGATAAAGCACATTCTTTTAAGAATGTATCTATTTCTAGC
TTTTTTTCTTTATTTAAGCTACCTTTTAAGGATTCTAGTAACTCTGGTTTTACAGTAGATAGAATTTCTTTTTCATATTGAGCAATTTTGTCTAATGGCA
TTCGATCGCAGAATCCATTGACCGCTGCGTAAATGACTAGAATTTCTTTTTCAATTGGCAATGGTGTATATTGTGGTTGTTTGAGTATTTCTGTCAGCCT
TGCTCCTCTATTGAGTAATGCCTGAGTGGCAGCATCAAGGTCTGAGCCAAATTGAGCAAAGGCGGCTACTTCTCGATATTGTGCCAATTCTAGTTTTAAA
CTCCCGCATACTTGTTTCATAGCTTTCAACTGAGCGGCAGACCCGACGCGACTGACAGATAATCCGACGTTAATAGCAGGTCTAATTCCGCGATAAAAGA
GCTCTGTTTCCAAACAGATTTGTCCATCAGTAATGGAAATTACATTAGTAGGAATATAAGCCGAAACATCTCCTGCTTGTGTTTGAATAACAGGTAAGGC
GGTCAAGCTACCTGCGCCTGTCTGGTCCGATCGTTTAGCCGCTCTTTCTAAGAGACGGGATTGTAAATAGAAAACATCTCCTGGGAAAGCCTCACGACCT
GGTGGTCGGCGTAACAATAATGACATTTGTTGATATGCCACGGCCTGTTTACTAAGATCATCATAGATTATTAATGCGTGCATTCCATTATTGCGGAAAT
ATTCCCCCATGGCACACCCAGAATATGGGGTCAAAAATTGTAGAGGAGTAGGATCCGAAGCGGTGGCTGCTACAAGAATGGAATATTCTAGAGCATTCGC
TTCTGAAAGAATTTGAACTAATTGTGCCACAGTTGAGCGTTTCTGTCCAATCGCTACATAGACACAATACAATGTCTCACTCTCTCCCTTGGCCTTTGAG
TTCAATTGCTTTTGGTTTAATATGGTATCGATAGCAATAGTTGTTTTTCCAGTTTGTCGGTCCCCGATTATAAGTTCTCGTTGACCACGACCTATAGGAA
CCACGCTATCTAACCCATTTAACCCTGTTTGCATAGGCTCGTGCACAGATTTACGTTCAATAATTCCAGGGGGCTTTCACTTCGACACGTCTTCGCTCGT
GAGCACTTAGAGCCCCTCTTCCATCAATAGGTACTCCCAAGGCATCGACCACACGCCCTAGCATAGCCTTTCCCGCAGGAACATCCACAATAGATCCAGT
GCGCTTGACAAGATCTCCTTCTTTAAGACCC