Detailed information on CNT30618986


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 5e-32

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30543268Sesamum indicumBrassica napus29.6340.4895.48929forward
CNT30147391Sesamum indicumMedicago truncatula34.142.2596.071069reverse complement

Expression of CNT30618986

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MMNNQSKDRSLEPLLSIRLVKRTHSNGVPFA*

>peptide 2 (30 aa)
MTNPERPLFRLRMPNRRTDHSGGGGTLRGG*

>peptide 3 (30 aa)
MMSMARGRALNGLGWPHFALPTPRKLRIQA*

>peptide 4 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 5 (59 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESVSSGTFCQSGKVFGD*

>peptide 6 (42 aa)
RMHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG*

Sequence

>CNT30618986
AAAGAATGCATTGGATGGACGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGA
TCGGGAAACCGTATCCAAGCTTCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAGCTTAGCGAACTGAAACATCTGAGCAGCTAAAGGAAGGGAAATCAA
CCGAGACCCTGTTAGTAGCGGCGAGCGAGAGCGGATTGGGGGTTTGAAGAAAAACAAAGACGAAGCTTCGTTCCTCAGCAAAGTGTTCACTTATTTTTCA
CCAGGTTTCATTCGATTTGTTGTGGATTGGATGATGGAAAAACCAGTAAGCTTGAAAGCCCCTTTACTTTCTAGTAAAGGGCGCAGTGAACTGTAATTGT
GAAAAGATTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTCTGAT
CGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTAT
TTAGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGACCGAAGCTTAGAGCCTTTACTTTCTATTAGATTAGTAAAGCGCACTC
ACTCTAACGGCGTACCTTTTGCATGATGAACAATCAGTCGAAGGACCGAAGCTTAGAGCCTTTACTTTCTATTAGATTAGTAAAGCGCACTCACTCTAAC
GGCGTACCTTTTGCATGATGGTTTAGCGAGGAAATGGGAACAGCGGCTTGAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAATCTTCTAGTTCTTCCT
ATTTGAGCCAAAACCGATCGATCTACCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATG
ACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGA
GCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAAGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTTGGGTGCT
AAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAG
GTGGGCGTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAAG
CGACGAGACCTTGAAAGTGTCAGTAGTGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACTAGACCTGGAGATATCAGAAGTGAGAATGCTGACATG
AGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGTTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCC
GAAAGGGCTGTCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTATAGAACCATGCCTGTCTCTTGGAGCGAATTGGATGATCGGGCCGAAGG
CTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTAATATGAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCGGTCGCCCTACGCGACTGGCCC
TTCAAAAGGCGAAACTCTCGTCGTAGTTTGGCGACCTATCTTCAGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGGGGTCGCGAGAGAGCAGAGCGTACC
GCCCTGCCATAGTCACGAGTCTCTTTATATTCGCGACTCTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCT
CCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACCAGGGCGCTTGAGAGAACCACGTCGAAGGAACTCGGCAAAATGACCC
GGTAACTTCGGGAAAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAA
GTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGGAAGGAGAAGTGTTAGTTGCTTTGAATGGAAACCCCGGTAAACGGCGGCA
GTAACTCTAACTGTCCTATAGTAGCGAAATCCTTGTCGCACAAGTAGCAACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGG
TGAAATTGAATTCTCCGTGAACCTTAACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAATGACTAATC
CTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGAGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATG
CCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGT
CGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGTTGATGAC
TCCCAAGAGCTCTTATCAACGGAGTTGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGATTGTTCGCCGATT
TAAGTGGTACGTGAGTTGGGTTTAGAACGACGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAACCCTAGTACG
AGAGGACTGGGTTGGGCCAACCTATGGTCTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTACTGCGCAGCGGGAAA
TCCTTCTCTATACAAGTTCTCGGACGAGGTTTTTG