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Detailed information on CNT30618985


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676816Sesamum indicumSetaria viridis7.1934.3993.4276forward
CNT30158420Sesamum indicumPistacia vera11.452390.08121forward
CNT30304119Sesamum indicumTriticum aestivum7.7623.4397.5682reverse complement
CNT30511953Sesamum indicumSolanum lycopersicum24.6101.9689.23260reverse complement
CNT30649878Sesamum indicumRosa chinensis7.3835.6291.0378reverse complement
CNT30719848Sesamum indicumTriticum spelta7.8534.0297.5983forward

Expression of CNT30618985

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVHLLMGERRGLNPRVVDSQSTALIHLATSAPTPAQV*

>peptide 2 (42 aa)
MNDRPFHFCFQQVGDANLCFLCFNRNCLDAFELEMTCRKNAF*

Sequence

>CNT30618985
TTGACTCATGGGGTATGTGTTCTTTCTTGGCACTCTCTTTCTATATTATGCCAACCTAAAAAGAGCGATTGAGAGTGGGTTTCGGGTTCGATAGTGTCGA
GAAGGTATTAGCCACCGGTGACCGTACTTTCGTAAAAGCACCATTGGGCGGTGGTTCCTCTCCTTCCTCTTGAACCTCGAACAAAAAATAGATCTCGCCG
ACTAAGAGTTCCGAATTTCAAAAGTAAACTGAACTTGACTTAAGACGAAGGAACCGAGTGCCGAAAAAAACCGCTTTCTTAAGGCTTCAAACTACTAGTC
ATTAAGACTACTATGAAAGAAAAGTAAGGAAGTCCTTTTCTTGACTTGGCCTACGTGCACCTACCCCCTTTTTAAAGAACTTTATTTCAATCTCAACATA
GAAATGAAAGCATAACTCTTTGCTTCTTGTCCTCTTACTCTTTTAGCCTACCTTGTGGAGGTCTCTCGGGTGTCTACGGCAGATCATATCAGTCTCATGA
TGAAGAGAATTTCCGATCTTCCACTAAGAAAGGTATCGTCATGACAACTCAATTTGTCCGGTAAACTACTTGGGGCTCCCCATGGTTTAGTAAAAGGGAG
GGGAGATTTTCTCTTCATCCGGAGGTTCATTTCATTCATTGTGAACTCAAAGTGTAAGGCTTATTAGTGAGGTCTTAAAAACGTCATACAATGAATGATC
GGCCATTCCATTTTTGCTTTCAGCAAGTAGGCGACGCGAATCTATGCTTTCTATGTTTCAATCGCAATTGCTTGGATGCGTTTGAACTCGAGATGACTTG
CAGAAAAAATGCTTTCTAGGGTTGTCTTGTGTCTCCGAAAGAAATGGTCCATTTATTGATGGGCGAACGACGGGGATTGAACCCGCGCGTGGTGGATTCA
CAATCCACTGCCTTGATCCACTTGGCTACATCCGCCCCTACCCCCGCACAGGTTTAAGTCTCCATCTACGATCAGATCCTTTCTGAACTCCCCCATGCTG
CTATCAAAGCTTTTTCCTATACTATAGTTGCAGGTCTAAAAAAGTCTTTCGGAATTC