Detailed information on CNT30618949


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406993Sesamum indicumBeta vulgaris3.6321.9688.2485forward

Expression of CNT30618949

Peptides detected in this lncRNA

>peptide 1 (59 aa)
IDPRAASHAIGRGELRIDSEASARSKSRSLRVPNTNVQDRCRGKKQSPWTQCYPCEGKS*

>peptide 2 (61 aa)
MLCYQASLGHYLPHLICPYSLKSTSLLPFRGKGMTFLSSSLVYLFSFLCCFLPVVWFCPYY*

>peptide 3 (45 aa)
MATSLNLREVQVATYATRNFATLGQLELLPPFTGVSIQSTVRQSE*

>peptide 4 (71 aa)
MSADGPLSLKFNSPWYLLLDSRSLTPSKREKERTVRLLLFLHFRNRIRNSVASTETALQGQRSTLLVKTSL*

>peptide 5 (35 aa)
MGGRDDMKTPSTGSGSKLDHTRKKPKTRRKGEQAS*

Sequence

>CNT30618949
ATAGATCCACGAGCTGCATCTCATGCGATCGGGCGAGGGGAGTTGAGAATAGACTCAGAGGCCAGCGCTAGAAGCAAAAGTAGAAGCCTTCGCGTACCCA
ACACCAACGTACAAGACAGATGCCGGGGCAAGAAGCAAAGCCCATGGACCCAGTGTTATCCATGTGAGGGGAAGAGTTGAAGGAAAGGGGCAGCTAATTT
CATTTATTCTATCTCCCCCCCCCCCATGTCTTAGACAAGGCAATTTCTTTCACTTCATCCAGCATGACATTGAAAGGGCAGAGGGAATTGCACTAAGAAC
TCCTGCTTCAATGGGTGGAAGGGATGATATGAAAACTCCATCAACTGGTTCTGGCTCTAAGCTTGATCACACTCGAAAAAAGCCCAAGACCAGGCGCAAG
GGAGAACAAGCGAGTTAGCTGCTGTCGGAAAAAGCTAGCCATAGAGTAGTTCCATCGTGAGCCGAGGAGAGGACTGGAAGTTCATTCTGTGGAGTGAAGC
TGCTCTTTAGCCTAGGATCAAGATCAAGGAATTCTCAAAACCAGTCAACATAAGGCCGACCCACTTCCTACCTCTTGACTTCCTTGACGTCGAGCTAAAG
AGGAGGAGTTCTTCTCAAGCTATGTCCGCTGACGGGCCTCTATCTCTCAAGTTCAATTCTCCCTGGTACTTGCTCTTAGATAGCCGCTCGCTCACTCCTT
CGAAAAGAGAGAAAGAAAGGACTGTAAGGCTTCTACTCTTTCTTCACTTCAGAAATCGTATCCGTAACTCAGTCGCTAGTACGGAGACTGCACTGCAAGG
GCAGAGAAGTACTTTACTTGTGAAAACTTCACTATAGACTGCTTTCTTAGCCAATAACTCGATCTCTGAGAAGTAGTGCCATTGGTCTCATGGATGTCTT
TTCCTTCTTTTTAGAAAGAATGTTGTAAATGGTAGTAATATACCCCGTCAGTATGTGATGCATTGAGAGTCAGAGGAGTAGTGCCCCTTCTTACTGAAAG
AAGGAAACTATCTAATAGGTTGTCTGAGATCCCTGGATCAGTTAGTCATTCACATTCAGTAGTGGAGGAAGAAGAGGGCACCGGACACATTGGTCAGCTA
CTCTTCTCAGCGCACTAGAGTAGAAAGAAAGCAACGTCACCAACTGAACCGCTATAAGTCAGAGCGGCGCGAATCGAACGAACGGAGTTAGGCCACTAGT
CGCAGCACTGTTGGCTTTATTCTCTATGCAAGGCTATTAGCTTGCACGCCTTTCTTTAGAGGTTGCACTCTACTACGACTATTTTCAGAAAGCAAACCTG
AATTACATCCAGCCTCAAAACCATCGAGCCTCTATGAAAGAATTCGAAAGAGTCGGTCTCATTGATTGAGCATCCCCGAGATAGATAGATAGATAAGTTT
CCTTTTACTATTCATACGTAACTTCGGGCTTTAAGCATACAGAAAGATTGAGATCGGATGGCGACTTCGTTAAACCTTCGGGAAGTGCAGGTCGCTACTT
ATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGTTTCCATTCAAAGCACAGTGAGGCAAAGCGAGTGACAGGT
ATGCAATCCCCAGTAAAGTAAGCCAAGTAACAAATAGACTATCTACAACCTCTTCTTTCATTTGTCCTGACAACTGTTCTGAAAGAAAAGAATAAGTGCA
ACCTAAGACGCTTTTTTTCGCGACAAGAGCGGTTATGTAGCATCAACAGGAAAGTTATTTGGCAGTTGCTTTAGCAGCTCCTTCTCTAAGACCGGAGTCA
ATAGCAGCGCTTATTATTCCTTCAAGAGCTCCGAGTTTCACACGAACTGAAAGACATTCTACAATCACTTGCATTCAAACTGATCAATGCTTTGCTACCA
GGCTTCTCTCGGCCATTATCTTCCTCACTTGATCTGCCCGTACTCTCTTAAGTCGACTTCTTTGCTGCCTTTCCGCGGAAAAGGAATGACGTTTCTTTCC
AGCTCTCTAGTATACTTATTCTCTTTCTTATGCTGCTTTCTGCCTGTAGTGTGGTTCTGTCCCTACTATTGAGAAAATCACTGGATGCTCTTGCTGCTCT
GCTCCTCTAGTCATTGAACCAGCGCACTCCAATACAAGCTTCTCTTCTTTAATGAATGGGACTGACTCGGCTAAGTAAAGTGCAGTATCGGCTCTAATAA
AGAGAAAGAATCTATCCTTACCCTACTGCAGGAAAAAGCACTTTCTATCCCCCCGCGCTACAAAACAAACTTATCTAAGCACTCAAAGCAAAGCTGAAAT
AAGGAATGGGAGAAGCTATAGTGCAGATCACTTTTCACTTTCT