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Detailed information on CNT30618863


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2VEE8|RPOA_SOLTU, E-value = 4e-104

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201891Sesamum indicumPisum sativum2.3250.2383.49109forward
CNT30493471Sesamum indicumOlea europaea2.1125.1996.9799forward
CNT30560633Sesamum indicumActinidia chinensis3.1128.890.41146forward
CNT30591703Sesamum indicumMusa acuminata4.1722.3285.2196forward
CNT30511668Sesamum indicumSolanum lycopersicum6.0694.6889.12285forward
CNT30555953Sesamum indicumOryza glaberrima2.2325.9386.67105forward
CNT3076567Sesamum indicumBrassica juncea5.4570.5289.06256forward
CNT30228020Sesamum indicumAnanas comosus6.722.7886.03315forward
CNT3068454Sesamum indicumLeersia perrieri3.5326.9985.54166forward
CNT30205112Sesamum indicumHelianthus annuus3.3258.6592.31156forward
CNT3059025Sesamum indicumAmborella trichopoda6.6225.8184.89311forward
CNT30330242Sesamum indicumDioscorea rotundata4.1777.1784.18196forward

Expression of CNT30618863

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MFSGGIPCMTKSKVEHTCIVNMHKIVMNFHSFQFQ*

>peptide 2 (29 aa)
MSHLIEAHDSSNSSGYLIQVARLLYPFKL*

>peptide 3 (31 aa)
MSYPPRLCPISIEENDWTWLCPISIEENDWT*

>peptide 4 (38 aa)
MNTMIHILNRHEYNIYRITSILKVMWHFYKISAISLDI*

>peptide 5 (38 aa)
MPTLSFFLFLQGHSNKCILLFLLSNIDFYSGYQVRAAN*

>peptide 6 (38 aa)
MSIGSSRIESIFLSVASGLAVGFPRPKPSNDSVKENIP*

>peptide 7 (41 aa)
MRRDPPSHSLSFIQQKNYITGALPFRGSESTFLCFLGGSLA*

>peptide 8 (65 aa)
MIPLRKISHNKIYEIDGSDRTANAFIPSPPESPLCIAPSLFYEVEVKQASLSIEGERSESIYPVF*

>peptide 9 (56 aa)
MIGPGYARFQLRRMIGPNPLYRLASFPVRASSQNLDFHGSLGKRSYVANLLFSSYP*

>peptide 10 (79 aa)
MDQFLNTRYSRIFMGDVLRFYTCDTFPSMDVLRFYTCDTCSFYFSKQSSSHGNAYCVGLAFHKWRPNKAPIIKTFTVCS*

>peptide 11 (42 aa)
MSQKYMDISISCQKRFFICTLSPLASLTILVFVYVSGWNKLL*

>peptide 12 (46 aa)
MSKEILYLYIEPFSESDYPCLCLCLGLEQITIMHPRLRISRHFSQI*

>peptide 13 (45 aa)
MARLENVRTLLTSYSPPTLELFLNRGVKAQLGLFLSPMHERRIAF*

Sequence

>CNT30618863
GTGCTCGCTAACTTTTTCATCCGTGATAATTGACTAAACTCTGTCAGGTGCTATCTACGAAAACCAAAAGCTTCGGGTATCTTGAGGTTTAGAAGGACAG
CATCCGATCGGGAGACAGACCCTTCAGCGGCATCTACTGTCTATCTTCTTAATTCAGCTTTCGCGCCTGGTGAATCGAAAAAGCCTAGTTATTTATCTTC
GGAGACACGATTTAGCATTTAGTGGCAAAAACCCCTCTTGGGCGATCTTCTTATACGGACTTTATATCCCGTAAATAATATCTGACTTCTCGGCAAAGAC
CTACTCCAAATAGGTTGAGGAGGCATAAGTCAATGATGATGGCATCGAATGCATCTTTGAAAGGAAAGAAAAAGCTCTTGTCGCAATTATTGAATCAATA
GTTAACCCAGAGTAGGCTGCTTGAAAAAAAGCTCTAAGCCTTTCGCTCTTCCCTTCTCAATCCCGGCTAACTTTTTTCTTAACTACCTTATTCATGAACC
TTTTACCATTAAACAACGGGAGTTATGTCCTATCCCCCACGGTTATGCCCGATTTCAATTGAGGAGAATGATTGGACCTGGTTATGCCCGATTTCAATTG
AGGAGAATGATTGGACCTAACCCTTTATACAGGCTTGCTTCTTTTCCGGTTCGGGCTAGTTCGCAAAACCTAGACTTCCATGGCTCGCTTGGAAAACGTT
CGTACGTTGCTAACCTCTTATTCTCCTCCTACCCTTGAACTCTTCTTGAATCGAGGAGTTAAAGCTCAGCTAGGGTTGTTCCTCTCTCCGATGCATGAGC
GGAGAATAGCATTCTGATATTCTTTCTTAAGAAAACCTCAGTGGGGCATGCCCCAACCATAATCCAAGCGGGCCCAATGAGAAGAGACCCGCCCTCCCAC
TCTCTCTCATTTATTCAGCAAAAAAACTACATAACGGGGGCCCTTCCGTTCAGAGGTAGCGAATCCACTTTTTTATGTTTTCTGGGGGGATCCCTTGCAT
GACCAAGTCCAAAGTGGAACATACTTGTATAGTAAATATGCATAAAATAGTAATGAATTTTCATTCTTTCCAATTCCAATAGGAAATATTATATCGGAGC
CTTTTTGCACAACTCGCGGATTTGCCCTGTTCGTTTAAAGCGGAAAGCATCCTTTGGAGATCTGGAAAGGAAGACTCCCGATCTTTTTGTCGTCCTTGAA
AGAATCTCTCTCGAATGACTTTTGTCAATTCCCATTTGGATAAAGAGATTTCATTTTTGCGATGATTTTATTTTTAACCGAAAAGTGGTAATAGCTATAT
CCCTTAATCGTGCTTGCTGCTTAGGGGTTGCTGCTGACGGTGCCGTCCTATTCGGCTTCTGGCTTCAGCCTCAGATTTGTGTTGCCTTTCGTCCTTCGCT
TGCATCTAATAGCTTATAGGCTTCTTTCCTTGCTGCACTCATTCACTCCGGAAGTGACTACTTTACTTTCTTATACTAGCTATTTAAAGATCTATCTTAT
CTTGCTTACCGCGAATACTGAAAGAACTGGTGATTTACTGCTGCTCTTTGTGCTTATTTACCTTAGGGTCCCCTATGCAAGCATCATAACAGGCATTATA
AGACTGTCTGTAGTGTAGGCCGTAGGATCTATTTCATTCATTTCTTTTAGTGTCAAGTCAGAACAAGAGAGAAAGAAAGGTTTTTATTCGTCAGCCAGCT
AATCTTATGAAAAAATGAAAAAAAATCCAATAGATTTAAAGCTTCTTTTTTGGTAAATCAATTGCGAAATGTTTTTCTAGAATGCCCAATATCTGTTTTA
CATCTTCTAGGCGAAAATGTTCAATTTTCATAAGATCTTCTTGACTGTTATTCAAATCCAATAATGTATATATATTGGACCTTTTGAGGCAGTTATAGAC
CCTGGGAGACAATTCGGATTGATCAATAAAATTCGATTTCAATGCTATTTTCTTTTTGTTTTTTCTGAGTTTATCCAATTTATCGTGAAAAGTAAAAGGG
GATAAAGGAACCGTGCGTTGATTGTCCTCTAAAGGTAAGTTTTCTTCTTCCTTATGTAAAAAGGGAATAAATAAATCAATCAAATTTCGGGAGGCTTCAT
GAAGTGCTTCTTTCGGAGTTAAACTCCCATTTGTCCATATTTCGAGAAAGAGTATCTCTTATTTTTCATTCCCATTCCCATAGGAATGAATACTATGATT
CACATTTTGAACAGGCATGAATACAACATCTATAGGATAACTTCCATCTTGAAAGTTATGTGGCATTTTTATAAGATATCCGCGATTTCTCTCGATATCT
AATCCAATAGAAAAATGAATTGGTTCTGTCAAGCTAGCTATATGCTGTGTATTGTCAACGATTTCTACTCAAGCTAGCTATATGCTGTGTATTGTCAACG
ATTTCTACATAAGGTGGTAAGATGATATCTTGAGCAGTTAGATATTCAGGAGCCTTAACACAAATAGACGCGTCACAAGTTCCATATAGATTACTTCTCA
ATACAATTTCTTTCAAATTCATTAAAATTTCATGGACCAATTCTTGAATACCCGTTATAGTAGAATATTCATGGGGGACGTTCTCAGATTTTACACGTGT
GATACATTTCCTTCTATGGACGTTCTCAGATTTTACACGTGTGATACATGTTCCTTCTATTTCTCCAAGCAAAGCTCTTCGCATGGCAATGCCTATTGTG
TCGGCTTGGCCTTTCATAAGTGGAGACCGAATAAAGCGCCCATAATAAAGACGTTTACTGTCTGTTCTTGATTCAACACACTTCCACTGTAGTGTCCGAG
TAGATACTGTTACTTTCTCTCGAACCATAGTAATATTTTTTTATTTGATTAGATTATTTATTTCTCTTGTTTCTCTGGAAATTTCTTCACTGTTCATTTC
TACACACGTCTTTTTTTCGGAGGTCTACAGCCATTATGTGGCATAGGGGTTACATCCCATACATAAGTGAATAGTATACCACTTCTACGAATAGCATTTG
CTGCTGCAGTTTGAGCGGCAAAGGGTGTCCCTCTTCTCGTACCCTTGAATCCACAAGTACCGGCCGAGGACCAGGAAACCACCCGACCCCGGACATCTGT
AACTGTGACAATGGTATTATTGAAACTTGCTTGAACATGAATAACTCCCTTTGGTATTCTACGTGCACTCTTACGTGAACCAATACGTACATTCCTACGT
GAACCAGTTCTCGGTATAGCTTTGGCCATATTGTATCATCTCATAAGTATGAGTCAGAAATATATGGATATATCCATTTCATGTCAAAAGAGATTCTTTA
TTTGTACATTGAGCCCTTTAGCGAGTCTGACTATCCTTGTCTTTGTTTATGTCTCGGGTTGGAACAAATTACTATAATGCACCCCCGCCTACGGATTAGT
CGACATTTTTCACAAATTTGACAAACGAAAGCTCTTATTTTCATATTTGTCATTCCTTATCTTAATTCTGAATCTACTTCTTGGTAGAAAATAAGTTTCT
TCCAAGAATCAGAAATTAGACTCGAGAATCGATAGATCTCATTTGTGTACAGGGCCGTGGCACGACTCCAAGGGGATTGACAAGTTCTAAACGGAATATT
TGAACTTACTTGGAATCCGCCACAAAGGATTGCCTAATCGTAGTTTGTCGGAAAAGAGTGGACAAGGAATGAAAATCGACATACTTATGTAGGATTCGTC
TGTCTTATCTTTGAGCGTAGAACTCCAGCTTCGTATAGAGAGTTATCCAATGCCTACTCTTTCCTTTTTTCTATTTCTTCAAGGTCACTCTAATAAATGC
ATTCTGCTTTTCCTGCTATCTAATATAGACTTTTACAGCGGCTATCAGGTACGTGCTGCTAACTAGAGAGCACAAGACTGTCTCTCAAGTAGGGGACCTA
TTTTATTTGACACATCAAAATCAAAATAGAATATCATATATCCAAGTACAGGCTTTCTCCCTGAACTCCTGAGCTAAGGATTACATTTATTGCGCCTTTG
AACATGTCTCATCTAATTGAAGCGCATGATTCATCAAATAGTAGCGGATATTTGATTCAAGTAGCTCGACTTCTTTATCCATTCAAGTTATAGTGACTAT
CCATCCTTTTTGTTATTCTCATGTACTAGTAGGAAGTTCTTTGCCAGGATCAAAGTCTTCTTTAATCATCAGGAAGCTGATTTGAATAAAAAGTAAACAT
AGGATTAGGTCTCACCTGCGCTAGGGACTTTCATTGAATCAATCTCGGTATGTCAATCGGAAGCTCAAGAATAGAGAGTATCTTCCTTTCAGTAGCCTCT
GGTCTTGCAGTTGGGTTTCCTCGCCCAAAGCCTTCTAATGATTCCGTTAAGGAAAATATCCCATAATAAGATATACGAAATAGACGGATCAGACCGAACT
GCCAATGCATTCATTCCATCTCCACCGGAATCACCCCTATGCATAGCTCCTTCCCTCTTCTATGAAGTTGAAGTGAAGCAAGCGAGCCTCTCGATCGAGG
GAGAGCGATCTGAGTCAATTTATCCAGTATTTTAGGAAATGTTCGGGATAGATTCACGTTTTCCCTGTCTTTTATATATATATATAAATTAGCGCTTTTG
TGGGCTACGGGTGGAGGGCTATGAGCTCGTTCTCTCAATCCTGGGGAAACAACTTCCTTAGCCTTAGTTGGAAGCTAAACCAAAGTGAAGCTTGTAGGTT
C