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Detailed information on CNT30618776


BLAST search results

BLAST vs Swiss-Prot:
sp|P31839|NU1M_OENBE, E-value = 8e-49

BLAST vs NONCODE:
NONOSAT000950, E-value = 4e-13

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374070Sesamum indicumArabidopsis thaliana15.9899.195.15330forward
CNT30501325Sesamum indicumCoffea canephora58.2151.9491.851202forward
CNT3021612Sesamum indicumCitrullus lanatus4.3644.3395.5690reverse complement
CNT30401845Sesamum indicumBeta vulgaris13.4640.4785.61278forward
CNT30255597Sesamum indicumAvena sativa10.2724.2889.15212reverse complement
CNT30231730Sesamum indicumAnanas comosus6.735091.37139forward
CNT30655384Sesamum indicumRosa chinensis23.9760.1593.13495reverse complement
CNT30627396Sesamum indicumDaucus carota20.73101.990.65428forward
CNT30679583Sesamum indicumTriticum urartu26.6811.8292.92551forward
CNT3035046Sesamum indicumCucumis melo43.6334.889.12901reverse complement
CNT30104494Sesamum indicumOryza rufipogon7.8970.8788.34163reverse complement
CNT30577701Sesamum indicumOryza barthii11.3331.7986.32234forward

Expression of CNT30618776

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MHPDKGLINVRFPYASSRFTNVNRLYRRVGWLVIYSYAPSFFEPFGMYCPLTIDQIHQTEKFQFRTAAESSDLSTKGFVEFL*

>peptide 2 (30 aa)
MFGSDNTIPLSKGTTARSTRLNINVATGPF*

>peptide 3 (65 aa)
MQVLRVLSLPTSKHHLAGSCRYQQRERNNQMETTTNYGSWPRQRPRRRGDRSKRERLDDVFIPGL*

Sequence

>CNT30618776
TTAGCCTTGCTTGACTAAAGTCATTGCCCTCGCTCTTGAAAGCGGTCCGGATTCGCTCCGCCTTACACGATGTACCAAAAGAGTGTGGAAAGGTTCTTAT
GCTATCGATGTGAGGAAGACGAAAAGAAGGATAGAAAGGATCGATGTAATTGAGCTCGACTGATAAGGAGAGGAGCGAAGGAAATGGATGTCCCTATTGT
ATTTTAGATGGAGTCATCAACAGGGCTAAGAATCTTACCTTTACTTAGAGAGGGGTATCGGTACCACGCTCTTCCGTGCTCGTAGGTTGACTCCCCTATG
CATCCCGACAAAGGTCTCATAAACGTGCGCTTCCCTTATGCATCCAGCCGCTTCACTAATGTGAATAGGTTATACAGAAGGGTGGGTTGGTTGGTTATAT
ACTCTTATGCGCCTTCCTTCTTCGAACCTTTTGGTATGTATTGCCCCCTAACTATAGATCAGATCCACCAGACGGAGAAATTTCAATTCCGCACTGCTGC
TGAGTCGTCGGACTTATCCACCAAGGGATTCGTGGAATTTCTGTGAATTGGATTGGGGGAAATCTAGCAAAGCTAGGTAGATAGATAGACTCCTTTCCCG
CTGCTAAGGGCGAGCACAAAAGAAAATCCAATGATTGTTTCTTAACCAGTGCCCCCTTTTGGGTATGCAGGTACTAAGAGTCCTCTCACTACCAACCAGC
AAACATCATCTGGCTGGGTCTTGCCGGTATCAACAACGAGAAAGAAATAACCAAATGGAAACAACAACTAACTATGGCTCTTGGCCCAGACAACGTCCTA
GGCGTAGGGGAGATCGGAGCAAGAGGGAACGCCTAGACGACGTTTTTATTCCTGGGCTGTAGTAAGTAGATCGAGAGGTCGTTCCGCCCCTTGTCCCCTA
AGTTAGGTAATATGTTCTCGACCATTCTTGCTCCAATCTGACCTAGCTGGCGAGCGATCCCAGTTCGCGATAGAGAACAAGACAGCAAGCAAGCGTACCT
TTGTTCGCTTCTTCTCCACCAAGCATGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCCGATTCGATCCCCCCCCGGCCGGGAGGC
ATCTACCTCATCCCGATCACAAGGAGAGGTTCACTACGATGGGGGTATTTTTTTTTCCCTTCCAGAAAGAATGAAATGCATAGGGGACCATCCTTTTGTT
GCGGCATGCTCCTCAGATTTACGGATTTGCAGGGGGCCTCAGGCCCTACTTAGTTAACTAACAATGACAAAGGCTTGCGAAACTAAGTAGCGCCTTTTCC
TTTTTGAATAACCCATTCTCAAACTCTTTCATAAGGCAAACCTATAGGTCCTTAGTAGCGTTGACAAAGAAGAAAAGCGCCGGTTAAAGCGAATCTTTTT
CTTTCAATCTAAATAATAGAACGATCTCTTTTTTATGACTTCTACTTATCAATCCCGGCCCAGAAAAGTGACCGACCAGGGCCCTATTGATGAATGAAAG
AAAGGGTTTATGAGCCCTAGCCCTGTAAGCCCATACCTGTGCAGAGTAGATCGTTCAACACCTGCGGCACAAACCTATTTTTGACCTATTGGTCCTAGTA
TCATAGGCGACCGAACGGCCGCCCCCTAATTACTAGACCGACCTGCTATAATAATTCCATAAACACCTAGCAAAGATATGGCAAACAAATAAAGTAGCCC
TATGTTCGGATCTGACAATACCATACCATTATCAAAAGGTACAACGGCCCGTTCAACTAGACTTAACATAAATGTAGCCACTGGGCCATTCTAAAAAGGG
AGAAATTAGCACTACTTGGTGAAATAGGTTCTTTTAGAATCAAATTCAAACCATCTGCTAGAGGTTGTAACAACCCAAACGACCCCACTACATCAGGACC
CTTTCGACGTTGCACAAAAGCCATTACTTTACGTTCCGCTAGCACTAAAAAGGTTACTCCTAGTAGAAGTGGAACAGCTATGTACATTTTCAATTTTCTA
TTCACTCATGATCTGGCCTGGTCGACCCAATCATGATCTATTTGGATGGGACTTTTCTCAAAAAA