CANTATAdb - search

Detailed information on CNT30618591

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30283133	Sesamum indicum	Chenopodium quinoa	62.13	55.61	95.61	456	forward
CNT30383121	Sesamum indicum	Triticum turgidum	61.72	82.66	92.94	453	forward
CNT3089447	Sesamum indicum	Vigna radiata	61.72	42.5	93.16	453	forward
CNT30311969	Sesamum indicum	Camelina sativa	61.85	48.87	95.15	454	forward

Expression of CNT30618591

Peptides detected in this lncRNA

>peptide 1 (50 aa)
HGEVVTINNNSGLDESGNWNEYNLNPLTRIHWRASLVPAAAVIPAPIAYI*

>peptide 2 (40 aa)
MQPQSGGKFRPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 3 (33 aa)
MRPGRMWNGESRYRGERLIEPSSSWFPPKFPSG*

Sequence

>CNT30618591
GACACGGGGAGGTAGTGACAATAAATAACAATAGCGGGCTCGACGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAG
GGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGGGTTGGGCCG
GCCGGTCAGGCGGGATCACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAC
AGCCCAACTTGAGAATCGGGCGGCTTCGCTGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGTGGCGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCG
GAGAGGGTGAGAGCCCCATCGTGCCCGGACCCTGCCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAAT
TCCGTCCAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCGTGAAA
TTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGTCGGATGTGGAACGGCGAGAGCCGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGT
AGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGC