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Detailed information on CNT30618587


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550295Sesamum indicumIpomoea triloba98.9588.6496.341038forward
CNT30730384Sesamum indicumCorchorus capsularis100.187.4395.811050forward
CNT3089434Sesamum indicumVigna radiata93.9961.5193.41986forward
CNT30334956Sesamum indicumCynara cardunculus10057.8991.991049forward

Expression of CNT30618587

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MDGAEARDLHPAVGARARPRGVGGRGGRRKTLGASPGGAAVGADLGGSSKYSNENFEGRRGERFHVNGTCTWVSRS*

Sequence

>CNT30618587
GACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCAAAGTTTCCCTCAGGATAGCTGGAGCTCGAGCGCGAGTTCTATAGGGTAAAGCCAATGATTAGAGG
CATCAGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTCCGTTGAGCCGCGCCAGGGAATCGAGAGCTCCAAGT
GGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGG
TCGATTAAGACAATAGAACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCG
CGGAAGCGCGCGACCTACACCCGGCCGTCGGGGCAAGGGCCAGGCCCCGAGGAGTAGGAGGGCGCGGCGGTCGCCGCAAAACCCTGGGCGCGAGCCCGGG
CGGAGCGGCCGTCGGTGCGGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGC
ACATGGGTTAGTCGATCCTAAGGGTCGGGGGAAGCCCGACAGACAGCGCGTTCAGCGCGTGCTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGAC
GCGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGC
TCAGCCGGAGGTAGGGTCCAGCGGCTGAAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCG
TCCGCGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGTCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGAAAAATGAATCCG
TAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACAGGGGTCCCAG