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Detailed information on CNT30618341

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30712072	Sesamum indicum	Glycine max	52.04	44.32	95.73	281	forward
CNT30637481	Sesamum indicum	Capsicum annuum	55.93	67.41	97.02	302	forward
CNT30369921	Sesamum indicum	Oryza glumipatula	42.04	98.7	98.24	227	forward
CNT30484247	Sesamum indicum	Chara braunii	24.26	9.41	89.31	131	reverse complement

Expression of CNT30618341

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGSRRLNVAANPSQKAEMKKSFLLFRIIR*

Sequence

>CNT30618341
AATATTAAGGTCCCAAGGGTTCGGTTGTTCGCCGATTTAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGT
GTTAAAGGGAGAACTGCGAGGAGCCAACCCTAGTACGAGAGGACTGGGTTGGGCCAACCTATGGTCTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAG
CTAAGTTGGTATGGAAGAACTGCTGCGCAGCGGGAAATCCTTCTCTATACAAGTTCTCGGACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTA
AGCACCGCGAGGTGTGAAGCGATCTCGTACTAAACGAAACGACTTTCAACTCTTATGGGGTCTCGAAGACTGAATGTAGCTGCCAACCCTAGTCAGAAAG
CTGAAATGAAAAAGTCTTTTCTACTTTTTCGAATAATAAGGTAAGCTTCATAGCCCCAACCGGGGTCCTTAGACCGCAGCTTACTAAGCGCTGGTTCTAT
CCCGCCGGCCCTAGGTGGGGGGAGACAAGGACGGAGAGGG