Detailed information on CNT30618214


BLAST search results

BLAST vs Swiss-Prot:
sp|P46259|TBA1_PEA, E-value = 1e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640127Sesamum indicumNymphaea colorata35.5614.6688.89117forward
CNT30359416Sesamum indicumLactuca sativa29.7913.7182.6598forward
CNT30482824Sesamum indicumChara braunii42.5518.481.43140forward
CNT3024728Sesamum indicumPopulus trichocarpa27.9611.3391.392forward

Expression of CNT30618214

Peptides detected in this lncRNA

>peptide 1 (77 aa)
VGNHANSSLHLGQVTTRHHSWWLVVDTTLESCWAPVHKLNSSLGLDGGNSSIHIFGNNITPVHQTAEITGAYEESMK*

>peptide 2 (30 aa)
MVATAAFTSLGTTSPLYIRQQRSQGHMKKA*

Sequence

>CNT30618214
GTTGGAAATCATGCAAACAGCTCTCTGCACCTTGGCCAGGTCACCACCAGGCACCACAGTTGGTGGCTGGTAGTTGATACCACACTTGAATCCTGTTGGG
CACCAGTCCACAAACTGAATAGTTCTCTTGGTCTTGATGGTGGCAACAGCAGCATTCACATCTTTGGGAACAACATCACCCCTGTACATCAGACAGCAGA
GATCACAGGGGCATATGAAGAAAGCATGAAGTGAATCCTCGGGTATGGGACCAAGTTGGTCTGGAACTCATTCACATCAACATTCAAAGCTCCATCAAAC
CGCAGAGAAGCAGTCAGAGAAGAGATCAC