Detailed information on CNT30618209


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376056Sesamum indicumArabidopsis thaliana12.2626.2887.0177reverse complement
CNT30379393Sesamum indicumManihot esculenta11.1523.19070reverse complement
CNT30634223Sesamum indicumCapsicum annuum11.1523.979070forward
CNT30261535Sesamum indicumBrassica rapa11.3123.3692.9671reverse complement
CNT30718122Sesamum indicumMalus domestica golden27.0755.0286.47170reverse complement
CNT30623316Sesamum indicumDaucus carota12.12588.1676reverse complement
CNT3030049Sesamum indicumTheobroma cacao14.4929.6489.0191reverse complement
CNT3058191Sesamum indicumAmborella trichopoda10.9922.4889.8669reverse complement

Expression of CNT30618209

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQLPTWRGRARIMPLESSQPNRPNVQSP*

>peptide 2 (51 aa)
GKQQKGLKKGRGSWVSGWMGLDIFPNSIKSTKRNNSTRCSWKRILTKLINC*

>peptide 3 (62 aa)
MKPRPTPKHHGPTPHLERAGQNYAAGIQPAESTQRPVTLMPPLGLQARVTELGEQYKQAMNQ*

>peptide 4 (31 aa)
RKATERIKKGERFLGFWLDGFGYFSQQYQIN*

>peptide 5 (50 aa)
MKYLVTNVMREKSDCPIRTNPTSFNGSKQHQPVILPLQRAGSDRCSVKPA*

Sequence

>CNT30618209
CAGGAAAGCAACAGAAAGGATTAAAAAAGGGGAGAGGTTCTTGGGTTTCTGGTTGGATGGGTTTGGATATTTTTCCCAACAGTATCAAATCAACTAAGAG
GAACAATTCAACTCGATGTTCCTGGAAGAGAATTCTTACAAAATTAATTAACTGCTAAAAAATTATTATAAACCAAAGAGAAAAGGTGAATTCATCATCG
GTGCTATTTAACAACAAAATGACATATTTAGGAACAAAAATTTGAAGCTAAAATGCTTAAATGAAATATTTAGTAACTAATGTGATGAGAGAAAAAAGTG
ATTGTCCAATTAGAACCAACCCAACTAGCTTTAATGGATCCAAGCAGCACCAACCTGTTATCCTTCCACTGCAGAGAGCGGGAAGTGATCGCTGCTCTGT
GAAACCAGCCTGACGCGGTGCCCTCCGCTCTAAGGGCCATGAAGCCCAGGCCTACGCCCAAGCACCATGGCCCAACTCCCCACTTGGAGAGGGCGGGCCA
GAATTATGCCGCTGGAATCCAGCCAGCCGAATCGACCCAACGTCCAGTCACCTTGATGCCCCCACTTGGGTTACAAGCCCGCGTTACCGAGCTCGGCGAG
CAATACAAGCAGGCCATGAATCAATAAG