Detailed information on CNT30618191


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S8P4|RHRE_PEA, E-value = 3e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690449Sesamum indicumOryza sativa9.4827.2782.93123forward
CNT30672592Sesamum indicumSetaria viridis10.3246.8585.07134forward
CNT30339202Sesamum indicumEragrostis tef6.3923.7187.9583forward
CNT30595500Sesamum indicumOryza meridionalis13.5627.5989.77176forward
CNT3099889Sesamum indicumOryza rufipogon23.2742.985.1302forward
CNT30574949Sesamum indicumOryza barthii13.4125.0789.08174forward
CNT30117942Sesamum indicumOryza nivara6.4720.5991.6784forward

Expression of CNT30618191

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSGSPPQTPLPLNVITTIITATATLPAMPCSKKL*

>peptide 2 (52 aa)
MVHHFYLFILKIKQINFSTPQKSLHLFHYLGANLDLIFWTSLVPIWNALVRT*

>peptide 3 (51 aa)
MTAAGDLPLFFWKWTRTLAVVMKPTSSWPSRTKTISVARGWVWGGLRPPGA*

>peptide 4 (94 aa)
MRRKQAEILIHGTPFLFIYSKNKTNKFFNPTKKPPLISLLGRELGLDLLDFLGTDLECLGENMIRHRRRGTEQRDGEGLSPRQLAVEGGDDGSG*

>peptide 5 (59 aa)
MRERETPRVLRPGILWTLAPVTSEPRVLLVEPGLARPSKKKSSAVKLDLQGNPLTVTAV*

Sequence

>CNT30618191
TGCATTTGCACTAATTAGTAACAAAGATAATCATGTCAAGGCATCGAATTTATTATTGATTACATGAAAAATGAGAAGAAAACAGGCAGAAATTCTCATA
CATGGTACACCATTTTTATTTATTTATTCTAAAAATAAAACAAATAAATTTTTCAACCCCACAAAAAAGCCTCCACTTATTTCATTACTTGGGCGCGAAC
TTGGACTTGATCTTCTGGACTTCCTTGGTACCGATCTGGAATGCCTTGGTGAGAACATGATCCGGCACCGGCGGCGTGGCACCGAACAGCGTGACGGCGA
GGGACTGAGTCCCCGGCAGCTGGCTGTTGAAGGCGGCGATGACGGCAGCGGGTGACTTGCCGTTGTTCTTCTGGAAGTGGACGAGGACGTTGGCGGTGGT
GATGAAGCCCACGTCGAGTTGGCCCTCGAGGACGAAGACTATCTCAGTGGCGCGGGGGTGGGTGTGGGGCGGGTTGAGGCCGCCGGGGGCGTAGTCGATG
CGGGAGAGGGAGACGCCGAGGGTGTTGAGGCCAGGAATCCTCTGGACGTTGGCGCCGGTGACGAGTGAACCGAGGGTGTTGTTGGTGGAGCCGGGTTTGG
CTAGGCCGTCGAAGAAGAAGTCGTCGGCCGTGAAGTTGGACTTGCAGGGGAACCCGTTGACCGTCACAGCTGTTTAAGATATGAAGCAAGAATCAATAAT
GCAAGAAATATTAAATGGATTTAAATTAATTAATTAGGTAATAAAAAAATATATAGTTAGGACAGGAATTATTACATACGTAACAATATATAATAATAAT
TACATAGGCGTATTGAGTGAGCGAGTGTGTAAGATGTATATATAAAATAGAAAAGAAGTTGCAATAAGAAAGGAAGAGGAGATCCAATCTGAAGCATTGG
ATATTTGAGGAGTTGGGTTGAAATAGTGAATGGTAAGTGAGATTTTTGTTTGTTTATTGGGAGAGAGCAGAGCAGAAATATGGTGATGGAAATTGGAGAG
ATGAAAGAGAGATTGAGTTGATAGATAGTTAAGTAGGTACCAGAATTAGTGAGCTGAGCAACGCAGAGATCTTGGAGCATGTCTGGATCGCCGCCCCAAA
CTCCTCTGCCGCTCAACGTAATCACCACCATCATTACTGCTACTGCTACTCTACCCGCCATGCCTTGTTCCAAAAAGCTGTAGCTTCTGTTTTTCCTTTG
TGTTGTGTTGAGGCAGACAATAAAGTAGTCACTATTTATAAGCTCAACTTCCTTACATTTCAAATTTATGACTTTTTCCGGGCTGTAAAAGCTACGAA