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Detailed information on CNT30617856


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30566050Sesamum indicumActinidia chinensis93.0998.3296.331172reverse complement

Expression of CNT30617856

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQRNRTEIL*

>peptide 2 (44 aa)
MHPFQKSGFVARISSRITTVIRVAGTIKQTITDLMSHSQFHSLN*

>peptide 3 (29 aa)
MRRRHEGRAIRRVIMNHRSNGRSPCRPFI*

>peptide 4 (33 aa)
MGAGITAAAGTKLALQWILVKGVRLYSFQLPDA*

>peptide 5 (32 aa)
MKYECPRLSLLIITPIPKANVIGPKSYNVIPR*

Sequence

>CNT30617856
ATACTCCCCGCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGTCGATCGCTGGTCGGCATCGTTTATGGTTG
AGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATA
AATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACGTAATAGGACCGAAAT
CCTATAATGTTATCCCACGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAGT
TAAGACCAGGAGCGCATCGCCGGCAGAAGGGACGAGACGACCGGTGCACACCAGAGGCGGACCGGCCGGCCCAACCCAAGGTCCAACTACGAGCTTTTTA
ACTGCAACAACTTAAATATACGCTATGGGAGCTGGAATTACCGCGGCTGCTGGCACCAAACTTGCCCTCCAATGGATCCTCGTTAAGGGAGTTAGATTGT
ACTCATTCCAATTACCAGACGCGTAGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCT
TGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTAGGCCACTATCCTACCATCGAAAG
TTGATAGGGCAGAAATTTGAAGGATGCGTCGCCGGCACGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGCAGCAACGGGCGGAGCCCGTGTCG
ACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAGGTACCATCAAA
CAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTA
CTGGCAGGATCAACCAGGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGG
CTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAAGCAGGTAGCATTCCTCAC