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Detailed information on CNT30617775


BLAST search results

BLAST vs Swiss-Prot:
sp|A9LYE6|RR7_ACOAM, E-value = 5e-68

BLAST vs NONCODE:
NONOSAT000698, E-value = 1e-130

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695659Sesamum indicumOryza sativa78.8562.1487.55522forward
CNT30677883Sesamum indicumSetaria viridis68.8830.5687.5456forward
CNT30730546Sesamum indicumCorchorus capsularis57.5564.4792.65381forward
CNT30406883Sesamum indicumBeta vulgaris9.6724.989.0664forward
CNT30198866Sesamum indicumPisum sativum42.686.590.43282forward
CNT30300194Sesamum indicumTriticum aestivum7924.8687.76523forward
CNT30384007Sesamum indicumTriticum turgidum63.4448.1186.19420forward
CNT30569656Sesamum indicumActinidia chinensis67.0752.7392.79444forward
CNT30543269Sesamum indicumBrassica napus78.717.694.05521forward
CNT30509374Sesamum indicumSolanum lycopersicum12.08409080forward
CNT30598987Sesamum indicumFraxinus excelsior39.128.7197.3259forward
CNT30136937Sesamum indicumLolium perenne75.5379.1187.2500forward
CNT3018230Sesamum indicumZea mays78.2571.6587.64518forward
CNT30607385Sesamum indicumGossypium raimondii2918.1887.5192forward
CNT30230544Sesamum indicumAnanas comosus22.3630.5293.92148reverse complement
CNT30627895Sesamum indicumDaucus carota23.8751.9794.94158forward
CNT30153780Sesamum indicumPrunus persica50.4537.3294.31334forward
CNT30331679Sesamum indicumDioscorea rotundata68.2865.9993.36452forward
CNT30150659Sesamum indicumBrachypodium distachyon13.4438.0388.7689forward
CNT30115844Sesamum indicumOryza nivara78.8559.9387.74522forward
CNT30603929Sesamum indicumOryza punctata12.5420.891.5783reverse complement
CNT3049028Sesamum indicumCucumis sativus26.286094.83174forward

Expression of CNT30617775

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MIYVSSFVSFSFVSRNLSINSDSFFFLLILFRSRCIDPVHGLMKMCKNSICLCHFMSLFLFAYGIATPFGSIH*

>peptide 2 (45 aa)
MYRSCSWINENVQKLYLPLPFYESLPFCVWHRHSLWQHPLIRNLI*

>peptide 3 (65 aa)
MPLITNEWKVFFLVWFLFQWELDLSIHLHVLLLLVYRELLHVLLDVKQMVDLFMSFVEFFSWLDR*

>peptide 4 (49 aa)
MASPLPLAASTNSELNLKAIFRSGHFRDAANNQRMESVFPCVVPISMGT*

Sequence

>CNT30617775
CTCTTTAAGAAAGTCCCCGAGAGGGCTTAGTTGATCCATGATTTATGTTTCATCTTTCGTTTCTTTTTCGTTTGTTTCAAGAAATCTATCGATCAATTCG
GATTCTTTTTTTTTTCTCTTGATTCTTTTCCGATCGAGATGTATAGATCCTGTTCATGGATTAATGAAAATGTGCAAAAACTCTATTTGCCTCTGCCATT
TTATGAGTCTCTTCCTTTTTGCGTATGGCATCGCCACTCCCTTTGGCAGCATCCACTAATTCGGAACTTAATTTGAAAGCCATATTTCGATCTGGACATT
TTCGGGATGCCGCTAATAACCAACGAATGGAAAGTGTTTTTCCTTGTGTGGTTCCTATTTCAATGGGAACTTGATTTGTCGATCCACCTACACGTCTTGC
TTTTACTGGTATATCGGGAGTTACTCCATGTATTGCTTGACGTAAAACAGATGGTGGATTTGTTTATGTCTTTTGTTGAATTTTTTTCATGGCTCGATAG
ATAATTTGATAAGCCAATGATTTTTATTCCGTGTTTCATAATACAGTTAACCAACATGTTAACTAATCGATTATGATATATTGGATCGGATTTTGCTGTT
TTTTCTTCTGCAGTACCTCGACGTGACATGAGCATGAAAGGGGTTTAAGAATCAGTTTTCTT