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Detailed information on CNT30617718


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 5e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512572Sesamum indicumJuglans regia28.4448.8183.55389forward
CNT30703592Sesamum indicumQuercus lobata20.6163.9581.56282forward
CNT30380980Sesamum indicumManihot esculenta23.3936.5779.69320forward
CNT30635730Sesamum indicumCapsicum annuum20.5440.5579.72281forward
CNT3094104Sesamum indicumSolanum tuberosum15.7936.8681.02216forward
CNT30599104Sesamum indicumFraxinus excelsior13.4558.4185.87184forward
CNT30653577Sesamum indicumRosa chinensis13.3834.7283.61183forward
CNT30120137Sesamum indicumCitrus clementina21.0532.6579.51288forward
CNT30725655Sesamum indicumLupinus angustifolius21.4930.8582.99294forward

Expression of CNT30617718

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MEEVIRDLEEAMIMLAMADLLLLFFLFLFLYYYYFPVSLVSGNDW*

>peptide 2 (32 aa)
MRNKNSNAMMGRVRLKSKRAAFSISTASDGGA*

>peptide 3 (44 aa)
MKFKILGWAVLLTCCPCTSLSIGGLFLFFRAELQVSGFLTFHFY*

Sequence

>CNT30617718
GACAAATGCAATTGAATTGCTAATATTGAATTTGAACTCAACAGCCACTAAAACCATTCAGTCTAAACACAAATCTTAACAGAGTAACTCCCAACACTCA
TTCATTAATTATTATACAGTATGTCTTTAGATCATTTGCACATCACATCAATCATAACCCAAAAGAAAGAACGGAAAAGAAAAGGGTACCCAAATTAACT
ACAAATCGAAGTGGATACATAACTTGCAATCCACAAACCAAAAGAAGGCATTTTTCCTCAAGAAACAGGGAGCACCTTCTTCACTATCTCCTCACTAAGG
GCTGCAATCTGCGAATCAAGTGCTTTCACAGTTTCCTCCTTCTGCTTCTCCAAACTAGACAAGGCCTCCTGCAGCTCAGCCTCCACCTTCTTTCTTCCCT
CCGCCAGCTTCTGCTCCACCTCAATCTGAGTCTCCTTCTTCATCTTATTGAGGGCTGCCGATATCTCCGCCCTGGCGGCCTTCATCACCGCCGCCGCCTG
GTCCTCCAGCTGTTTCACCTCTGTAGAAGTGTCCTTCACGCTGTTCAGCTTCTCTCTAATCGCGGCGTCTCTTTCATCCATGAATTTTCCAAGTGGGGTG
TAGTAAACCTTGTCTAAGGCAAACATGAGGAACAAGAATTCCAATGCAATGATGGGGAGGGTGAGATTGAAATCGAAAAGGGCTGCCTTTTCGATTTCCA
CAGCGAGTGACGGCGGCGCGTGAGCGAGTGAGAAGGTGGTGGCGGCGGCGAGGAGGGAGGGTAGTTGGTGGAGTTTTGCGAATTTGGGCAGCGCTATTTT
AGGTAGGGAACGTTGGGGGAGTGGGTGGGGATGGGATTTGAGTTTGGGGGTGGGGGGAATGGAAGAGGTTATTAGAGACTTGGAAGAGGCCATGATCATG
TTAGCCATGGCTGATCTGCTGCTGCTGTTCTTCCTCTTCTTGTTTCTGTATTATTATTATTTTCCTGTTAGTTTAGTTTCTGGGAATGATTGGTGAAAAC
AATTTTTGAATATCTTCACAGAGCCGAAGGCTATCCCTTTGTGTGCCACACAATTATGGTGAGGTTGGGATTGAACTGAAATGAAATTCAAGATTCTGGG
CTGGGCCGTGCTGCTCACGTGCTGTCCATGCACCAGTTTAAGTATTGGTGGTCTTTTCTTGTTTTTTAGAGCTGAGCTGCAGGTTTCTGGTTTCCTAACA
TTCCATTTCTATTGATTATTACGAGTGTATGATTTGATTGGAGCTCACAGAACTCTCATTCAACCGGATACAAGTGATGGTGCAGCAGTCTTTGCTATGT
ATGAATCTTTAAGTGATGGTGCAGCAGTCTTTGCTAAGTATGAATCTTTTTTACACCCATGATAATTG