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Detailed information on CNT30617713


BLAST search results

BLAST vs Swiss-Prot:
sp|Q85FN2|ATPH_ADICA, E-value = 3e-27

BLAST vs NONCODE:
NONMEST005034, E-value = 4e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703171Sesamum indicumQuercus lobata23.013.7887.58451forward
CNT30268703Sesamum indicumChenopodium quinoa18.0631.6489.83354forward
CNT3021394Sesamum indicumCitrullus lanatus19.2360.1392.84377forward
CNT30200674Sesamum indicumPisum sativum12.626.1493.52247forward
CNT30486613Sesamum indicumOlea europaea3.8324.048875forward
CNT30505351Sesamum indicumNicotiana attenuata38.8821.9289.5762forward
CNT3095993Sesamum indicumSolanum tuberosum35.0517.1788.79687forward
CNT30567675Sesamum indicumActinidia chinensis19.3441.8882.59379forward
CNT30541457Sesamum indicumBrassica napus18.7222.9290.46367forward
CNT30511193Sesamum indicumSolanum lycopersicum31.0234.3187.17608forward
CNT30553466Sesamum indicumOryza glaberrima6.8425.6790.3134forward
CNT30172770Sesamum indicumTrifolium pratense13.9853.7385.77274forward
CNT30598585Sesamum indicumFraxinus excelsior13.7831.6591.11270forward
CNT30609661Sesamum indicumGossypium raimondii19.3422.0583.91379forward
CNT30126536Sesamum indicumCorymbia citriodora16.2867.5883.39319forward
CNT30626489Sesamum indicumDaucus carota10.6123.7293.75208forward
CNT30726491Sesamum indicumLupinus angustifolius19.2332.3689.92377forward

Expression of CNT30617713

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MNYPLIVATPHKKSVPWTTNGKDESESVC*

>peptide 2 (42 aa)
SEFFFYHFAPLFYLFFSFFFEIESKNIQVIKYELPLDCCNTS*

>peptide 3 (30 aa)
GQSSFSITLPLFFIYSFLFFLKSSQKIFKL*

>peptide 4 (63 aa)
MTGIGTTEGTKETRTTTTNSSAKIFPKSRKLSDKGFVKSSKMLMGKRIGVGEYISRNNLIPFW*

Sequence

>CNT30617713
GGTCAGAGTTCTTTTTCTATCACTTTGCCCCTCTTTTTTATTTATTCTTTTCTTTTTTTTTTGAAATCGAGTCAAAAAATATTCAAGTTATAAAGTATGA
ACTACCCCTTGATTGTTGCAACACCTCATAAAAAGAGTGTTCCTTGGACTACGAACGGGAAGGATGAAAGCGAGTCGGTATGCTAATTCCTCATCTGCAA
ATCAGCCCCTCCCGTAGGTTGTTTTCTCAACGAATAAGGAATTGTAGGAGTGAAATCCTGATGTAATTTGAAAAAGCAAACGACAAGTCCAAAGCAATAA
AATAGGAAAAATATGTATTTTTCCTATTTCTAAGATTAAACAATTAAACAAAAGGATTCGCAAATAAAAGTGCTACAACCAATCCATAAATCGTTAAAGC
TTCCATAAAAGCTAGACTAAGCAATAGAGTACCTCGTATTTTTCCCTCTGTCTCGGGCTGTCTCGCGATACCCTCTACGGCTTGACCTGCAGCAGTCCCT
TGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACGGAAGCAGCAGAAATCAGTGGATTCATGATAAGTTCCTCGTACC
AACAAAAAGAAATGGTTAATGATACAATCAACCAATGAATTATGACTTAATTATTCCATTGATAGGATTCATCCAGTCGAAGTAACTAAGAACTTCGAAT
TTAAGTAATACTATTATTGAATCATCAGAACTACTTCGATATCTCTTTTTTGTTTCTATCCCCAGAGTTTTTGTGAATCCATAGAACTTTCGTTCTTCTA
TTTCTTCGTTCCGAACTGTTATTTCAATTCTTCCATTTTTTCTTGATTTCATCTCTTTATTCAGTCAATTCACAGCCACAACGATACGAAAGGACTTCTA
TTCAAACCCACACAGTAGTAGGGCAAATGAAATATATCTTTAGTTCATATATAACTAGTCAATATCTAATATCACATATACATGCCTTTCTTTCATAACG
TAAACCATTAGATTCAATCGGATTCGAGAATCAATCCATTTTTGTAGGAATCCTGTTTTTTGTAAATTCTTTTCTCCCTTCCGTTTTCTTTATCATTATT
TCAACCGAATACAATCTAAATGGGAAAATTTAATTGATTAGGGCGAATTATTGAATAGAAATATCATTATTTGATTGATCGAAGTTCATGCAATTTATTA
TTTATTAATATTTTCTTTTGGTCAATTGTTGAATAAAATCAACTGTAAAGTAGAATTGTTTCTACTGTTTTTTATTTAATCACACGTCGTAAACATATAT
CTTATTCAAATCATAATTTGAATAAGAAGATTGGCTGACCAATATAATAGAAAGTGAATATTCGTCGAGGAAAGGTAGTAAGTGGACGAAAGGAGAATTT
TAGGAAAAAGATCTTTTAGATCTCTTTCCCTTTTTTTTGACAACTCTCTAATATCGTAATTTTTGATTTTTTTTGTTCCTATTGCTTTCTATCATATATA
GAGTCTTGTATATTTCTTTTCCTTAAATAAATCATCTTCAGCCGCACATACATTGCTTTGCACTAAGCTAAAAAAAAGACTATTTCAATGATGGCCCTCC
ATGGATTCACCTATATAAGCCGCGGCTAATGTTGCAAAAATAAGAGCTTGAATACCACTTGTAAATAATCCAAGGAACATGACAGGGATAGGAACTACTG
AAGGTACTAAAGAAACAAGAACAACAACTACTAATTCATCCGCTAAGATATTCCCGAAAAGTCGAAAACTAAGTGATAAGGGCTTTGTGAAATCTTCTAA
GATGTTAATGGGTAAAAGGATTGGGGTTGGTGAATATATTTCCCGAAATAACCTAATCCCTTTTTGGTAAGACCTGCATAGAAATATGCCACTGACGTGA
GTAAAGCCAAAGCAACAGTAGTATTTATATCATTCGTAGGTGCGGCTAACTCTCCATGAG