Detailed information on CNT30617700


BLAST search results

BLAST vs Swiss-Prot:
sp|P62981|RS27A_SOLTU, E-value = 1e-84

BLAST vs NONCODE:
NONPOPT001132, E-value = 2e-67

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316655Sesamum indicumCorylus avellana9.8571.7587.61226forward
CNT30728895Sesamum indicumCorchorus capsularis10.0231.7287.83230forward
CNT30725948Sesamum indicumLupinus angustifolius10.0728.2187.01231forward

Expression of CNT30617700

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MPIHNVLVCRGKYTFPIQVLDVKRNSQPQVQIPEAECNPRAFLEHISMHFAIKMILITKLEQQWCQQL*

>peptide 2 (88 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSKVMVLPVRVFTKICIFAAEGLQRLGFVRRGMRLIAMGNSWLNRLGFAGRYFWACLLLGV*

>peptide 3 (45 aa)
MSFGMIKKWKKKLYFNNIPIIDIVKILEGKEKQICHSLVDSIIGN*

>peptide 4 (66 aa)
MIRHESTSTALRVRALLPQPLHLSGIIHLVELENSELHLLLLVLDLLRLGVGLLLALLRASTESED*

>peptide 5 (31 aa)
MSREIVNHKCKSQKQNVTREHSLNISVCTLR*

>peptide 6 (37 aa)
MVSATLTVNYLRLNSMSKHITLKTKRMFKPKYLDNTN*

Sequence

>CNT30617700
CACATTTTTTAGTATTGTATTAATATATGCATATTCCCGTAACCAGACTGAGAGCATAATTGTCATGTAGGACCGAAATTAAGTAGGAATACCATGAGTT
TTGGAATGATAAAGAAATGGAAAAAGAAATTATACTTTAATAATATTCCTATAATTGATATAGTAAAAATATTAGAAGGCAAAGAAAAACAAATTTGTCA
TTCTTTAGTTGATTCCATAATTGGTAATTGAAAGTGAATGATTAGTAAAATTGCTTATAGAAGGTCATGAACAATTTATAAATTATTTCATTTGTTTTAA
AAAAGAATAAATGAGAAAATTTATTTATTTATTTAAAAAATACTTTGTTAATTCAATAAGTACATAGAAAGTATTTTGTAGAAACACTTATAATTATTCG
AAAAGCAAATGGATTAATATATTTATCAATAATACATCTACCATTATCCAATATTATCATGTTAATAAAAAGGTAGTTTTGTCAATAAAAAGATCCATTC
CCTCATGTTAGGAAACACTAATCAACATCCTCTCCCCTCGTAGATTAATGATGGAGAAAATGTTGAGATGAAATTAAGAGGGTGTTTGGCGTAAAGTAAA
CACCGTCTAATAAATTATCACACTATATACCTAATTTACTTATTCTGATAGAATTTCAGATAAAACTAATTTGAGAAACAAATTAAAAGAAAGAAATCAC
GCAACTTTATAGACCAAATATTTGTGCAAGTCACATGCAAATATGGTGGGATTTAATTCATAATTTGAGCTATCAATCACCGGCCCGAATGACATCACTT
GAACCAATCTAAATGCAAGTAAACAAGAGGTTCAGCTGGACATCTCGCCACAAGTAAAAGAGGCCTAAGGAAAATAAGAATTCTTCTGTACAGGGAATTC
CCTAAGTCCAATCATATATTAAGGCATAGACTTCCAAATCACTCCCACGTTCTTTAGAGATATTAGTCCCCAAGGGTTGAGCCCGTTTATTAGAGTAGAG
ATATTAGATATAATTTTTTTAAACTTGAGGAGGTTTACAAGTTCCCCTATGATTAAAGGCAGAAAGGCATATTATCTCAAGGAAAAATACTACATTCCCA
AGTAGAAGACTCGAGGAAAATCCTCCCACTCTAGGATGAACCAGTGAATTTGAGAATTCAAAGGAAAAGGAAACCAACAACTATTTCACGCCCAAAATGC
ACGATTACTAGAAATTAAATTCTTCAGTCACAAGCCAAAACTTAAGTCCCAACAAATCTCTCCCTTAAGAGAGGAGGAGTTATGCCCATACACAATGTAT
TAGTTTGCAGAGGCAAGTATACTTTTCCAATCCAAGTGCTGGATGTCAAGAGAAATAGTCAACCACAAGTGCAAATCCCAGAAGCAGAATGTAACCCGAG
AGCATTCCTTGAACATATCAGTATGCACTTTGCGATAAAAATGATACTGATAACGAAATTGGAACAGCAATGGTGTCAGCAACTTTAACTGTAAATTACT
TAAGATTAAATTCCATGTCTAAACACATTACTTTGAAAACAAAACGCATGTTCAAACCAAAATATCTAGATAATACCAATTAAACTCATTCACGAATGAT
GGGATAAAACGATATGACAACGAACAAGGTTTCGCAAATTAGGCTTGGTAGTCTCAATCGCCGCCTGCCTTATTGTAGACATAAGTAAGCCCACACTTAC
CACAGTAGTGCCTATCAAAATGATTCGCCATGAAAGTACCAGCACCGCACTCCGCGTTCGGGCACTCCTTCCTCAGCCTCTGCACCTTTCCGGAATCATC
CACCTTGTAGAACTGGAGAACAGCGAGCTTCACCTTCTTCTTCTTGTGCTTGATCTTCTTCGGCTTGGTGTAGGTCTTCTTCTTGCGCTTCTTCGCGCCT
CCACGGAGTCGGAGGACTAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCATCCTCGAGCTGTTTCCCGGCGAAGATGAGAC
GTTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTATCGGAGGATTCTACCTCCAAGGTTATGGTCTTGCCCGT
AAGGGTCTTCACGAAAATCTGCATCTTCGCGGCGGAGGGGCTGCAAAGACTAGGGTTTGTGAGAAGAGGAATGAGATTGATCGCTATGGGAAACAGCTGG
TTAAATAGATTAGGGTTTGCAGGGAGATACTTTTGGGCCTGTTTGTTATTGGGTGTTTAAAACGCTTACCGGCCATTAAAAACCACGCTTTTAAC