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Detailed information on CNT30617597


BLAST search results

BLAST vs Swiss-Prot:
sp|A0ZZ34|PSAB_GOSBA, E-value = 1e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678731Sesamum indicumSetaria viridis21.2266.5791.27229forward
CNT30202037Sesamum indicumPisum sativum30.129.9994.46325forward
CNT30560220Sesamum indicumActinidia chinensis30.1220.997.23325forward
CNT30682212Sesamum indicumTriticum urartu30.129.8692.62325forward
CNT30484006Sesamum indicumChara braunii14.6443.5381.65158forward
CNT30430934Sesamum indicumPapaver somniferum27.624.5695.64298forward
CNT3057627Sesamum indicumAmborella trichopoda30.0357.1490.12324forward
CNT30585620Sesamum indicumEchinochloa crusgalli30.126.3393.54325forward

Expression of CNT30617597

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MFTFLTSVVVVRISIATGLSLHRIKLAKGVRS*

>peptide 2 (29 aa)
MTFKHNMLLDYLSLCQTFRPIICCSFCIF*

>peptide 3 (48 aa)
MVRFFFKMLLLIPSLTACFLSKEGCSLVVAAKFQLVVALHSALCILQL*

Sequence

>CNT30617597
GAATTTTCTTTGCTGATATTGGTTAAAAGATTTTGCCAATTCTCATTTCATTTTGCAATTCACCCATAATCCTACTGTTTCTATGCTGGAAGATTTTTTA
CTTGAATATACCGTTAAAAGGATTTGAACTATGTACTTGTCTGAATAATCGCTCACTCAAAAACCTCATAATCCAAAACCCAATTTGATGTGTTTGTTCC
TTCTGCATCCATGGTAAGATTTTTCTTCAAAATGCTGTTATTGATTCCATCATTGACAGCTTGCTTCTTAAGCAAAGAGGGATGTTCTTTGGTTGTTGCT
GCTAAGTTCCAACTGGTTGTTGCACTTCATTCAGCTTTGTGTATTTTACAACTATGAATTTATATGACCTTCAAGCACAATATGCTTCTCGATTATCTTT
CTCTGTGTCAGACTTTTAGACCTATCATTTGCTGCTCCTTTTGTATTTTTTAAGTATTGAAGTTGACTGTTTATAGAGTTTCTAAAATTGGAAAAGTGAA
AATTTTGGGTATGTTTACTTTTTTGACCTCAGTAGTAGTTGTTCGAATAAGCATCGCCACAGGTTTATCTCTCCATCGAATCAAATTGGCCAAAGGTGTG
CGTTCATGAGCCCATGCTAAAGTTTCAATCAATTCCTGCCAATATCCACGCCAGGAGATTAAGAACATAAATCCAGTAGCCCAAACAAGATGTCCAAATA
AGAACATCCATGCCCAGACCGATAAACTATTCATACCAAAAGGGTTATATCCATTGATAAGTTGTGAAGAGTTTAACCATAAATAATCTCTTAGCCAGCC
CATCAAATAAGTGGAAGATTCATTAAACTGTGAAACGTTACCCTGCCATAATGTGATGTGCTTCCAATGCCAATAAAAAGACATTATTACTTTAAGTGAT
ATGGCATTTTGAGAAAATAAGGTATGTATTTTGGATGGAGCTTAACTTTGGGATGTTAAAAAAGAGGGAATAGTAGTGATAAATCTGGGAAATAGGGAGT
ATGATGTGTTTTCCTTGAAGTAACTTACTGTTTCCTTTCCATGAAATGAAATTAATATCTTGTAGAAAACTATTGTCAG