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Detailed information on CNT30617519


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7Y052|CALM_EUPCH, E-value = 3e-79

BLAST vs NONCODE:
NONBRAT001381, E-value = 2e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672655Sesamum indicumSetaria viridis15.836083.33318forward
CNT30534974Sesamum indicumEucalyptus grandis2.7923.0591.0756forward
CNT30545709Sesamum indicumIpomoea triloba15.6833.7385.08315forward
CNT30379145Sesamum indicumManihot esculenta11.149.5682.51223forward
CNT30487677Sesamum indicumOlea europaea7.6742.4287.01154forward
CNT30156599Sesamum indicumPistacia vera19.1651.0687.01385forward
CNT3096793Sesamum indicumSolanum tuberosum17.8257.187.43358forward
CNT30125031Sesamum indicumPhyscomitrium patens12.133.9479.42243forward
CNT30560106Sesamum indicumActinidia chinensis18.6270.385.56374forward
CNT30234205Sesamum indicumBrassica oleracea8.1131.4180.98163forward
CNT30553673Sesamum indicumOryza glaberrima16.7244.0484.82336forward
CNT30248464Sesamum indicumAvena sativa8.3127.4284.43167forward
CNT30311950Sesamum indicumCamelina sativa18.7752.2981.43377forward
CNT3080440Sesamum indicumBrassica juncea8.0629.7283.95162forward
CNT3014113Sesamum indicumZea mays6.6728.6987.31134forward
CNT30607166Sesamum indicumGossypium raimondii8.5647.1284.3172forward
CNT30231884Sesamum indicumAnanas comosus14.2927.2381.88287forward
CNT30216184Sesamum indicumKalanchoe fedtschenkoi9.8140.5384.26197forward
CNT30346128Sesamum indicumEragrostis tef10.0533.7286.14202forward
CNT30479425Sesamum indicumArabidopsis halleri18.7264.1679.52376forward
CNT30367748Sesamum indicumSorghum bicolor11.6560.1585.47234forward
CNT3026117Sesamum indicumPopulus trichocarpa4.5321.2184.6291forward
CNT30120491Sesamum indicumCitrus clementina12.269.0186.53245forward
CNT3037982Sesamum indicumCucumis melo7.9128.881.76159forward
CNT30332036Sesamum indicumDioscorea rotundata8.3153.0285.63167forward
CNT30148143Sesamum indicumBrachypodium distachyon8.5633.3383.72172forward
CNT30101815Sesamum indicumOryza rufipogon11.0540.9685.59222forward
CNT30576402Sesamum indicumOryza barthii15.8342.2384.91318forward
CNT30497675Sesamum indicumDigitaria exilis9.4131.7183.6189forward
CNT30594303Sesamum indicumEragrostis curvula18.6258.3584.76374forward
CNT30175579Sesamum indicumVigna angularis10.536.4486.26211forward
CNT30335796Sesamum indicumCynara cardunculus9.1646.2384.24184forward

Expression of CNT30617519

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MMKSELENHYTYRPCSSFFLFSFFFFPYFVFIKVSRLTGGGDITWPS*

>peptide 2 (30 aa)
MRENNEIEPSPSLSKRLKASLNSEIWSSVN*

>peptide 3 (54 aa)
MRFKNSGKSMVPLPSASTSLIISWSSASVGFWPRDLITVPSSLVVMQPTDEFHK*

>peptide 4 (78 aa)
MTNKYLYHKHIISTASQFSRVFHLALLLNLNYTESPSLFSILHILFFTCHFTNTSTLNMNNHTRRSITHTHSKQNIFI*

>peptide 5 (49 aa)
MRWALSDFSLFLAKQVSVIYQPNCQTNVTLERKGQTLFNSVDKHRNSNL*

>peptide 6 (40 aa)
MSSTQHQYQYSQYGLIQSNQNQVAKPVPSTVSKAIALYQT*

>peptide 7 (41 aa)
MLFSFRLGAPQADYGFFQPLKFITSRHNNANKIILIQPSKK*

>peptide 8 (37 aa)
MSLKLLQMSHKAQEKGTVKSPPPFYNRSLKPPMTYKL*

>peptide 9 (38 aa)
MKCNDEKRTRKPLHIPTLFIFFSFFFFFFSIFCIHKGF*

Sequence

>CNT30617519
CTTACTGAATCAACCCTTACAAGAACATAAAATTCTTTCCTCACAAAGTCACAAGAAGCTTTAAGGGTGGAATGAGTCTAAAATTGCTGCAAATGAGTCA
CAAAGCACAAGAAAAAGGAACAGTGAAGAGTCCACCACCATTTTACAACAGATCATTAAAACCTCCGATGACTTATAAACTATGAAATGCAATGATGAAA
AGCGAACTAGAAAACCATTACACATACCGACCTTGTTCATCTTTTTTTCTTTTTTCTTTTTTTTTTTTTCCATATTTTGTATTCATAAAGGTTTCTAGGT
TGACTGGAGGTGGGGACATCACTTGGCCATCATAACCTTGACAAATTCTTCATAATTGATTTGCCCATCACCATCGACATCTGCTTCCCTAATCATCTCG
TCTACTTCCTCATCGGTGAGCTTCTCGCCAAGGTTGGTCATTACATGACGAAGCTCCGCAGCTGAGATGAAACCATTCTGATCCTTGTCAAAAACACGGA
ATGCCTCTTTAAGCTCCTCTTCGGAGTCAGTATCCTTCATCTTCCTGGCCATGAGGTTCAAGAACTCTGGGAAGTCGATGGTTCCATTACCATCGGCATC
AACCTCATTAATCATATCCTGGAGCTCGGCCTCAGTGGGGTTCTGGCCCAGGGATCTCATTACAGTTCCAAGCTCCTTGGTGGTGATGCAACCTACAGAC
GAGTTTCATAAATAGTTAGTTAAAACAAATACTAAATGTATACAAAACAACAATAAAACAAAAGGCCATAATGTTATTTTCTTTCAGGCTGGGCGCACCC
CAAGCAGACTACGGCTTCTTCCAACCTTTAAAATTCATAACAAGCAGACATAACAATGCCAACAAAATCATACTGATACAGCCATCAAAGAAATAGATCA
TAATCTACAAACAAAGCAAGAAACAATGACAAACAAGTACTTATATCATAAGCATATCATATCAACGGCTTCACAGTTCTCACGAGTATTTCACTTAGCA
CTTCTACTTAATTTGAATTATACAGAGAGCCCCTCTTTGTTCAGCATACTTCATATTTTGTTCTTCACATGTCATTTTACCAACACTTCCACACTTAACA
TGAACAACCACACTAGAAGATCTATCACACACACACACTCCAAACAAAACATATTCATCTAATTGTGATCCTATCAAGAACCATGAGCTCAACCCAACAC
CAATACCAGTACAGTCAATATGGACTAATACAGTCCAACCAAAATCAGGTCGCGAAACCTGTTCCAAGTACAGTTTCCAAGGCCATAGCTTTATATCAAA
CTTGAATATAATCCTAGGTATTGAACTTCTTATATAATCAAGCTAAGAAAATATTTCCTCAACAGCCAAGAGAACCCACATCATCTGAAGCCCCAAAACA
ATACCCCTCTGAACCCTAAAGTCGAGCAATTAAAAAGCTAACCCACGGCTATATCTAAATCAGGGGAAACGATATTTTCCAATCAAAAAGGGAATAAGCA
ATCAGATCTGCCCTGAAAACAAAAACCCGACATCCAAAATACAAACACCCACAACCTATATACAAATAAATCACACACAACCACCCAACAGAGACATGTA
TAAAATTCGATAACAAGATTTATGTAAATATGGAACCGCGGTAAGATGAGAGAAAACAATGAGATCGAACCATCTCCATCCTTATCAAAAAGGCTGAAGG
CCTCCTTGAACTCAGAGATCTGGTCATCAGTCAACTGATCCGCCATTTCTCCTTCTCCTCTCAAACTTGTTCACCGAATTTTCCTTTGGTTTTTCTTGCC
CCGTGGGCTTTGAGATTTCTCGTAGAGAAAGATGGTTCTGGAAAATGAGATGGGCTCTCTCTGATTTTTCCCTTTTTCTAGCAAAACAAGTCAGCGTTAT
ATATCAGCCAAACTGTCAAACAAATGTTACGTTGGAGAGAAAAGGACAGACACTATTCAACAGCGTGGATAAACATAGAAATTCCAATCTCTAACCTCAT
AAATCCCGC